| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0092 |
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| Symbol | |
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| ID | 6161018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 96129 |
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| End bp | 96875 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641662836 |
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| Product | carboxymethylenebutenolidase |
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| Protein accession | YP_001789132 |
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| Protein GI | 171056783 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0019242 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCGTCC GCTCCGAACA CATCGACCTG CCCGCCGGCG ACGGCGTGAT GCGCTGCTTC
ATGGCCATGC CGGAGCAGCC CGGCCGCTAT CCCGGCATCG TCTTCTACTC CGACATCTTC
CAGCTCACCG GGCCGATGCA ACGCGCCTGC GTGCGCCTGG CCGGCCACGG CTACACGGTG
CTGGCGCCGG AGATCTACCG CCGCATCGAG CCGGCCGGCA CGGTGATCGC CTTCGATGAC
GCCGGCCGCA GCCGCGGCCT GTCCGATGCC GAACGCACAC CGGTGGCGCA CTTCGATGCC
GATTGCCGGC TCGCGCTGGA TCACCTGGCG AGCCACCCTG CGGTGGCGCC GGGCCAGCTC
GGCGCGGCCG GTTTCTGCAT CGGCGGACAC CTGGCGATGC GCGCCGCGCT GCAGCCTGAC
GTCAAGGCCA CCGCCTGCTT CTACGCCACC GGCGTGCACA ACGGCAAGCT CGGGCAGGAC
GCCGACGCCG GCACGCTGCA ACGGCTCGGC GAGATCGGCG GGCGATTGCT GCTGGTGTGG
GGCACAGCCG ACCCGCACAT CCCGGCCGCC GGCCGCGACC TCATCGAAGC CACGTTGCGT
GCGAAGAACG TCGACTTCGA GCAGCGCCTG TACGCCGCCG AACACGCCTT CATGCGCGAC
GTCGGCGCGC GCTTCGACCC CGAGGCCGCC GACCTGGCGT TTGCCGAGGC GGTGGCGTTT
TTCAGGGCGG CGTTTCGCCC GGCGTGA
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| Protein sequence | MIVRSEHIDL PAGDGVMRCF MAMPEQPGRY PGIVFYSDIF QLTGPMQRAC VRLAGHGYTV
LAPEIYRRIE PAGTVIAFDD AGRSRGLSDA ERTPVAHFDA DCRLALDHLA SHPAVAPGQL
GAAGFCIGGH LAMRAALQPD VKATACFYAT GVHNGKLGQD ADAGTLQRLG EIGGRLLLVW
GTADPHIPAA GRDLIEATLR AKNVDFEQRL YAAEHAFMRD VGARFDPEAA DLAFAEAVAF
FRAAFRPA
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