Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0090 |
Symbol | |
ID | 6161016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 94738 |
End bp | 95370 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641662834 |
Product | flavin reductase domain-containing protein |
Protein accession | YP_001789130 |
Protein GI | 171056781 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00316855 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGATCG ACTTCGCCGA ACTGACCGCC TACCAGCGCT ACAAGCTGAT GGCCAGCCTG ATCGTGCCGC GGCCGATCGC GCTGGTCACC ACGCTGGGCG CCAACGGCGT GGCCAATGCG GCGCCGTTCT CGATGTTCAA CATGCTCGGC GAAGACCCGC CGATCGTGAT GCTGAGCATC AACCGGCTGC ACGATGGCCG CCTGAAGGAC ACCGCCGCCA ACATCCTGGC CAGCGGCGAG TTCGTGGTGC ACCTGTGCGA CGAGCCGCTG GCCGCGCAGA TGCACGCCTG TGGCGAGTCG CTGCCGCCGC AGGTCAGCGA GCTTGCCAAG GTCGGTCTGC ACGCCGTGCC GTCGCAGACG GTGGCGCCAC CGCGCATCGC CGAGGCGCCG GTGGCCTTCG AGTGCGTGCT GCACGAGAAG CTCGAAACCG CGAGCCGCTA CATCTTCATC GGCCGGGTTC AATGGCTGAG CGTGCGCGAG GGCCTGGTCG ACCGCGAGAC CTGGCGCGTG CGGCTGCAGG ACTACCACCC GGTCGGCCGC TTCGGCGCGA GCTTCTACGT CACCACGCGC GATCGTTTCG CCATCGGCGA CACGCAGGAT CCCTCGCGCA GCACCTCGAT CGACGAGATC TGA
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Protein sequence | MEIDFAELTA YQRYKLMASL IVPRPIALVT TLGANGVANA APFSMFNMLG EDPPIVMLSI NRLHDGRLKD TAANILASGE FVVHLCDEPL AAQMHACGES LPPQVSELAK VGLHAVPSQT VAPPRIAEAP VAFECVLHEK LETASRYIFI GRVQWLSVRE GLVDRETWRV RLQDYHPVGR FGASFYVTTR DRFAIGDTQD PSRSTSIDEI
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