| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0086 |
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| Symbol | |
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| ID | 6160352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 88612 |
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| End bp | 89895 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641662830 |
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| Product | D-serine deaminase |
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| Protein accession | YP_001789126 |
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| Protein GI | 171056777 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3616] Predicted amino acid aldolase or racemase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.01292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCTC CGACCGCCGA CGCCCTGATC GACCCCCAGC TCGACGCCAG CTTCAAGGGC
TATCCGCCCG ACGCCCCGCC GCTGCGCCGC TCGCAGATCG CCGCGAGGGG CTGGAACGTG
CTGGCCGGCG ACCTGCCCTT GCCGCTGGCG GTGATCCGGC GCGAGCCGCT GGCCCACAAC
CTCGGCTGGA TGCAGCGCCA CGTGGCGGCC GCCGGCATCG CGCTGGCGCC GCACGGCAAG
ACGACCTTGT CGCCGCAGCT GTTTGCCGCA CAGGTCGAGG CCGGCGCCTG GGGCATCACC
TTCGCCAACG TGCACCAGCT CGCGCTCGGC GTGGCCGGCG GCGTGCGCCG GGCGCTGATC
GCCAACCAGG TGATCCAGGC CGGCGACCTG CACCAGCTGG CCGCCTTGCG CGCGCAGCAT
CCGGGCCTGC GGGCGCCGTT CTTCATCGAC TCGGCGGCGC AGCTCGCGCT GATCGAGGCG
CAGGCGCTGC CAGCGCCGCT GGAGGTGCTG CTCGAACTCG GCCTGCCCGG CGGGCGCACC
GGCTGCCGCG GTCACGAGCA GGCGCTGGCG CTGGCCCGTG CGGTGCACGC CAGCCCGGCG
CTGCAGCTGG CCGGCATCAG CACCTACGAA GGCCTGTGGG GCAGCGGTGA CGACGCCGCC
GATCGTGCGC TGGCCGAGGG CCTGATGCAG CGCGTGCACG CCCTGGCGCT GGCCTGCGAG
CACGAGGCGC TGTTCGACAC CGACGAGGTC ATCGTCAGCG CCGGCGGCTC GGCGCTCTTC
GATCGGGTGT CGCAGGCCCT GCGCCCGCCG CTGCGCAAGC CGGTGCTCGG CCTGCTGCGC
TCGGGCTGCT ACGTGACGCA CGACGACGGC CACTACCGGC GCATGGTGCA CGTCGCCAAC
CGGCGTCTGG GCTGTGCCGA TGCCGACGGC CTGCGCGCGG CGCTGCAGGT CTGGACGCTG
GTGCAATCCT GCCCCGAGCC GGGACTGGCG ATCCTCAACG CCGGCAAGCG CGACCTGTCG
TTCGACATGG GCCTGCCGGT GCCGGTGATG TTCTGCCCGC AAGGCGAGCG CACCGCGCGC
GCGGTGCCGG CGGGCTGGCA GATCAGCGCA CTCAACGACC AGCACGCCTA CCTGCGGCTC
GGTGACGACG CCAGTGCGCT GCAGGTCGGC GACCGCGTCG CGCTGGGCAT CTCGCACCCC
TGCACCACCT TCGACAAGTG GCGCTGGATG CCGGTGGTCG ACGAGGCGCT GCGCGTGGTC
GACGCCATCA CCACGCTGTT CTGA
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| Protein sequence | MPAPTADALI DPQLDASFKG YPPDAPPLRR SQIAARGWNV LAGDLPLPLA VIRREPLAHN
LGWMQRHVAA AGIALAPHGK TTLSPQLFAA QVEAGAWGIT FANVHQLALG VAGGVRRALI
ANQVIQAGDL HQLAALRAQH PGLRAPFFID SAAQLALIEA QALPAPLEVL LELGLPGGRT
GCRGHEQALA LARAVHASPA LQLAGISTYE GLWGSGDDAA DRALAEGLMQ RVHALALACE
HEALFDTDEV IVSAGGSALF DRVSQALRPP LRKPVLGLLR SGCYVTHDDG HYRRMVHVAN
RRLGCADADG LRAALQVWTL VQSCPEPGLA ILNAGKRDLS FDMGLPVPVM FCPQGERTAR
AVPAGWQISA LNDQHAYLRL GDDASALQVG DRVALGISHP CTTFDKWRWM PVVDEALRVV
DAITTLF
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