Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0073 |
Symbol | |
ID | 6160297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 76003 |
End bp | 76926 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641662817 |
Product | Acyl transferase |
Protein accession | YP_001789113 |
Protein GI | 171056764 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
TIGRFAM ID | [TIGR03131] malonate decarboxylase, epsilon subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGG GCCTGCTGTT CCCCGGCCAG GGCACGCAAC ACCCCGACAT GCTGCCGTGG CTGGGACACG GCTGCGCGCC GCTGCCCGCG CTGGCACTGC TGGAATCCCG GCTCGGCGCC GACTGGCGCA ACCGCCTGGC CGACAGCGCC TGGGCCACCC GCAACGAGGT GGCGCAGACG CTGCTCACCG GCCTCAGCCT GGCGGCCTGG CAGCAGCTGC AGCCGCTGTT GCCCGCGCCG GCGGTGGTGG CGGGTTACAG CGTCGGCGAG CTGGCGGCGT TCAGCGCGGC GGGCGTGTTC GGTGCCGACG ACGCGCTGGC GATGGCGTCG TTGCGGGCGC GGCTGATGGA CGAGTGCGTG CAAGGCCAGC CCACCGGCCT GCTGTCGATC AGCGGCGCGG CACCCGGAGC GATCGACGAC CTGTGCCGCC GGCACGCGCT GGCGGTGGCG ATCCGCATCG GCGCCGATCG CGTCATCGTC GGTGGCTTGC GCAGCGATTT GCAAGCCGCC GAAGACGAAG CCGGCGCGGC CGGCGCCAGC TGCACGCGCC TGGCCGTGAG CATCGCCTCG CACACGCCGT GGATGGCCGC CGGCGTGCCT CGGCTGGCCG AGGCGCTGGC GGCGCGGCCC TTCGAGCGCC CGCGTGTGGC GCTGGTCTGC AACCACACCG GCACGACGCT GCGCACGGTC GACGCACTGC GCCAGGCGCT GGCCGCGCAG ATCGCCGCCA CCGTGCCGTG GGACCGCTGC ATGGACACGG TGGCCGAGCG GCGGGTGCGC TGCGTGCTCG AAGTCGGCCC GGGCAACACG CTGGCGCGGA TGTGGAACGC CCGCCACCCG GCGATACCGG CGCGCTCGGT GGACGAGTTC CAGGCGCCGG ACGCGGCTGC GCGCTGGGTG CACGAGGCGC TCGGCACCGA CTGA
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Protein sequence | MTLGLLFPGQ GTQHPDMLPW LGHGCAPLPA LALLESRLGA DWRNRLADSA WATRNEVAQT LLTGLSLAAW QQLQPLLPAP AVVAGYSVGE LAAFSAAGVF GADDALAMAS LRARLMDECV QGQPTGLLSI SGAAPGAIDD LCRRHALAVA IRIGADRVIV GGLRSDLQAA EDEAGAAGAS CTRLAVSIAS HTPWMAAGVP RLAEALAARP FERPRVALVC NHTGTTLRTV DALRQALAAQ IAATVPWDRC MDTVAERRVR CVLEVGPGNT LARMWNARHP AIPARSVDEF QAPDAAARWV HEALGTD
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