| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0068 |
|---|
| Symbol | |
|---|
| ID | 6160175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 70815 |
|---|
| End bp | 71318 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641662812 |
|---|
| Product | 2Fe-2S iron-sulfur cluster binding domain-containing protein |
|---|
| Protein accession | YP_001789108 |
|---|
| Protein GI | 171056759 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCC TCCACGTCAA CGGCGTGCGC CGTGACTTCG ATGCCGAGCC CGACACGCCC
CTGCTGTGGG TGCTGCGCGA GCAGCTCGGC CTGACCGGCA CCAAGTACGG CTGCGGCATC
GCCCAGTGCG GCGCCTGCAC CGTGCACATC GACGGCGTGC CCACCCGCAG CTGCGCGCGG
CCGCTGTCGA GCGTCGGCGC GGCGCAGAAG GTGGTCACGA TCGAAGGCCT GTCGCCCGAC
GGTTCGCACC CGGTGCAGAA GGCCTGGGCC GCGCTCGACG TGCCGCAATG CGGCTACTGC
CAGTGCGGAA TGATCATGGC GGCCAGCGCG CTGCTGGCCG AGAAACCGAA ACCGAGCGAC
GCCGACATCG ACGCCGCGAT CACCAACATC TGCCGCTGCG GCACCTACAA CCGCATCCGT
GCGGCGATCA AGGTGGCGGC GCAGGGCGGC GACCCCAAGG GCGCCGCGCT CGGCATCGTG
CACATCGACG GGAGCCGCGC ATGA
|
|---|
| Protein sequence | MATLHVNGVR RDFDAEPDTP LLWVLREQLG LTGTKYGCGI AQCGACTVHI DGVPTRSCAR
PLSSVGAAQK VVTIEGLSPD GSHPVQKAWA ALDVPQCGYC QCGMIMAASA LLAEKPKPSD
ADIDAAITNI CRCGTYNRIR AAIKVAAQGG DPKGAALGIV HIDGSRA
|
|---|
| |