Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0061 |
Symbol | |
ID | 6160285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 65087 |
End bp | 66136 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641662805 |
Product | thioredoxin-related protein-like protein |
Protein accession | YP_001789101 |
Protein GI | 171056752 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2143] Thioredoxin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACC TGCCGATCCG GCTGCTGTGC GGCCTGCTCT GCCTCGCTGC CACGCTGCTC GGCGCACCCG CCCGGGCCGC CGACGCCAAA CCGGCCGACG CCGCACACGC CGTGCCGCTG GCGATCGACA TCCCGCCCTG GTTCACCGAA GGTTTCCTCG ACTTCAAGGA AGAACTCGCC AGCGCCGGCC AGGCCGGCAA GCAGCTGATG GTCTACGTCG GCCAGGACGG CTGCCCCTAC TGCCGCGAGC TGATGCAGAC CAACTTCAGC CAAAAGCCCA TCGCCGACAA GACCCGCGTG CATTTCGTGG CGATCGCGCT CAACCTGTGG GGCGACCGCG AGCTGAGCTG GACCGACGGC CGCACGCTCA GCGAGAAGGC GCTGGCGCGC GAGCTCAAGG TGCAGTTCAC GCCGACGCTG CTGTTCCTCG ATGCCCGCGG CCAGGTGCGC CTGCGCCTCA ACGGCTACCA GCCGCCGCAG CGTTTCAGCG CGGTGCTCGA CTACCTGATC GGCGGGCACG ACCAGCGCGA AACCCTGGCG CAGTTCCTGG CCCGCTCGCC GGCCGCGCCG GCCCGGCCGC AGCTCACCGA CGAGGCCTTC TTCATGCCGG CGCCGCTCGA CCTGCGCCGC CGCACCGGCG CCCGGCCGCT GGCGGTGCTG TTCGAGACCC GCCACTGCCG GGCCTGCGAC GAGATGCACG ACCAGGGCTT CAAGCGGCCC GAGGTGCGCA CGCAGCTGGC GCGCTTCGAC GTCGCACGGC TGGCCCTGTC CGACGGCGCC GAGATCGTCA CGCCCGCCGA TCGCCGCCAA CGTGCCGACG CCTGGGCGCG CGAGCTGGGC GTGAGCTTCA CGCCCACGCT GGTGTTCTTC GATGCGGGCG GCGCCGAGGT CTTCCGGCTC GACGGCTACA CCCGCCCCTT CCACCTCGCC AGCGCCTTCG AATACGTGGC CGACGGCGGC TACCGGCGCG AGCCGGAGTT CCAGCGCTAC CTGCGCGACA AGGCCGACCG GCTGCGCGCA CGCGGCCAGC CGGTCGAGCT CTGGAAATGA
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Protein sequence | MKHLPIRLLC GLLCLAATLL GAPARAADAK PADAAHAVPL AIDIPPWFTE GFLDFKEELA SAGQAGKQLM VYVGQDGCPY CRELMQTNFS QKPIADKTRV HFVAIALNLW GDRELSWTDG RTLSEKALAR ELKVQFTPTL LFLDARGQVR LRLNGYQPPQ RFSAVLDYLI GGHDQRETLA QFLARSPAAP ARPQLTDEAF FMPAPLDLRR RTGARPLAVL FETRHCRACD EMHDQGFKRP EVRTQLARFD VARLALSDGA EIVTPADRRQ RADAWARELG VSFTPTLVFF DAGGAEVFRL DGYTRPFHLA SAFEYVADGG YRREPEFQRY LRDKADRLRA RGQPVELWK
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