Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0049 |
Symbol | |
ID | 6159821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 53567 |
End bp | 54580 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641662793 |
Product | putative nitrate transport protein NrtA |
Protein accession | YP_001789089 |
Protein GI | 171056740 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGATG CGATCCGCCA CTCTGCGAGC CGCCGCGAGC TGCTGCAAGG GGCCGCCGCG CTGGCGGCGT TCGGCAGCCT GGCCGGTGCC TGCAACCCGG CGGCCGCGCA GGAGCGGCCC GAGACCGGCA CGGTGCGTTT CAACCACTCG CCGTCGATCT GCCTGGCGCC GCAGTACCTG GCCGGCGAGC TGCTGCGCAA CGAGGGTTTC GACGACGTGC GCTACCTGCC GGTCGGCACG CGCGCCGCAC CCGACGCGCT GGCCGATGGC CGGCTCGATG TCGGCATGTG GTACACGACC GGCTACCTGC CGGTGCTCGA TGCCGACCGG CCGGTGGTGC TGCTGGCCGG GCTGCACCTG GGATGCTGGG AGCTGTTCGG CAATCACAAG GTGCAGAGCC TGCGCGACCT GCGCGGCAAG ACCGTGGTGT GCGAGAAGAT GCAGGGCGGC GACCAGATCC TGCTGTCGAG CATGCTGGCC TACGTGGGCA TCAAGCCGGC CGAGGTGAAC TGGCTGGCCC GCCCGCCGGG CAGCGCGATG AGCGCCTTCA TCGCCGGCAT GGCCGATGCC TTCCTGGCCT TCCCGCCCGA GCCGCAGGAG TTGAAACAAC GCCAGATCGG CCACGTGCTG CTCGACACCA ACGTCGACAA GCCCTGGTCG CAGTACTACT GCTGCATGAT CGGCGCCAAT CGCGATTTCG TGGCGCGCCA CCCGATCGCC ACCAAGCGCG TGCTGCGCGC CATCCTGAAG GCCACCGAGC TGTGCACCGC GCAGCCGGTG CAGGTGGCCG GCTACATGCG CGACCACGGC TACGAGCCGC GTTACGACAT CGGCCTGGCG GCGCTGCAGC GCATCAACTA CGACTACCGC GCCGCCGACC CGGCCGACAC GCTGCGCTTT CATGCGCTGC GGCTGCGCGA CATCGGCGTC ATCAGATCGA CGCCACAGCG GCTGATCGAA CGCGGCACCG ACTGGCGCTT TCTCAACGAG CTCAAGCGCG AGCTGAAAGC CTAG
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Protein sequence | MNDAIRHSAS RRELLQGAAA LAAFGSLAGA CNPAAAQERP ETGTVRFNHS PSICLAPQYL AGELLRNEGF DDVRYLPVGT RAAPDALADG RLDVGMWYTT GYLPVLDADR PVVLLAGLHL GCWELFGNHK VQSLRDLRGK TVVCEKMQGG DQILLSSMLA YVGIKPAEVN WLARPPGSAM SAFIAGMADA FLAFPPEPQE LKQRQIGHVL LDTNVDKPWS QYYCCMIGAN RDFVARHPIA TKRVLRAILK ATELCTAQPV QVAGYMRDHG YEPRYDIGLA ALQRINYDYR AADPADTLRF HALRLRDIGV IRSTPQRLIE RGTDWRFLNE LKRELKA
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