| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0044 |
|---|
| Symbol | |
|---|
| ID | 6160068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 49496 |
|---|
| End bp | 49888 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641662788 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001789084 |
|---|
| Protein GI | 171056735 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG CACCATCCCT TGCCGCCGCC CTCGCGATCG CCGCCGCTGG CATCTTCCCG
GCCCAGGCCG CACCGGCCGA CGAGCAGTTG CAGGACGTGC TGCAGCAGTA CCGCAGCGCC
GAAACCCGCG GCCAGTGGGT CAACGCCCTG ATGCCCGAAG CGACCGGGCT GGCCAGCGCC
GCAACCAGCG GCGACCAGCA CCTGGACCGG ATCGTCGCCA CCTACACCCG CGAGCAGCTC
GACCGCGGCG GCTGGGCCAA CGCCTGGGTG CGCGAGGACC ACTACGCCGC CGGCGAGCCG
CTGCTGGCGG TGCGCGTCGG TGAAGGCGTC ACCACGCGCG TGGCCTCGGC GCCGTTGCCG
GTGCAGCAGT TCGCGCTCGG GCTGCGCCGC TGA
|
|---|
| Protein sequence | MTTAPSLAAA LAIAAAGIFP AQAAPADEQL QDVLQQYRSA ETRGQWVNAL MPEATGLASA
ATSGDQHLDR IVATYTREQL DRGGWANAWV REDHYAAGEP LLAVRVGEGV TTRVASAPLP
VQQFALGLRR
|
|---|
| |