| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0040 |
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| Symbol | |
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| ID | 6160134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 44116 |
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| End bp | 45387 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641662784 |
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| Product | acetyl-CoA acetyltransferase |
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| Protein accession | YP_001789080 |
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| Protein GI | 171056731 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.632212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCATC CCAAGCAGCC GGGCCTGTAT CAGGCCTTCG ACGACGTCCA CCTGATCGAC
GGCCTGCGCA CGCCGCAGGT CGACCACCTG GGGGCCTTTG CCGATGCCAA CCCCATCGAC
CTGGGCATCC ATGCTGCACG TGCGGTGATC GAGCGCAGCG GCGTCGACGC CACCGCCATC
GACTCGGTGC TGGGCGGCAA CATGGCGCCG GGCGGCTTCG ACCAGTTCTA CCTGCCGCGC
CACATCGGTC TGTACGCCGG CGTGCCGGTG GAGGTGCCGG CGCTGATGGC GCAGCGCATC
TGCGGCACCG GCTTCGAGCT CTTCCGCCAG GCCGGCGAGC AGATCGACGC CGGCATCGCC
AGCCTGGCGC TGGTGGTGGG CACCGAATCG ATGACGCGCC ACCCGATCGC GATGTTCGAC
CACCGCGGCG GCTTCAAGCT CGGCCAGACG CCGGCGCTGA AGGACTACCT CTGGGAGTCG
CTCACCGACC CGGTCGCGGC GGTCTCGATG ATCCAGACCG CCGAGAACCT GGCGCAGAAG
TACGGCATCA CCCGCGCCGA GGTCGATGCG TTTGCCGCAC GTTCCTTCGC GCGCGCCGTC
GCGGCACAGG AGGCCGGCTG GTTCGATGGC GAGATCGCGC CGGTCGAAAG CAGCGTGTTC
GAGCTGCCCG GCTACCAGCC GCGCGCGCTG CGCCTGTCGG GCAAGAACAA GCGCGCCGAC
CGCGACACCC ACCCGCGCCC CACGCCGGCC GATGTGCTGG CTTTGCTGCG CCCGGTGTTC
AAGGATGGCG TGCAGACCGC CGGCAACTGC TCGGCCCTGA CCGACGCCGC CGCCGCCGCG
CTGGTCGCCA GCGGCGTGGT GGTGCGCGAC TGGCAGGCCC GCACGGGCCG CGCCCCGCTC
GCACGCATCG CCGCCACCGC GGTGGTGGGC GTGCCACCGG AGATCATGGG CATCGGCCCC
GCACCGGCCA TCCGCCGCCT GCTTGACGGC GCGGGCTTGA CGCTCGATGA CATCGCCCGC
TTCGAGGTCA ACGAGGCCCA GGGCGCGCAG ACCCTGGCCG TGGCCCGCGA ACTCGGTCTG
GCCGAGGACA GGCTCAACGT GCACGGCGGC GCCATCGCGC TGGGCCACCC GCTGGCGGCC
ACCGGCGTGC GACTGACGAT CACCGTGGCC CGCCAGCTGC AGGCCATCGG GGCACGCTGG
GGCGTGGCCA GCGCGTGCAT CGGCGGGGGC CAGGGGATCG CATTGCTGGT GGAAAACACG
GCCGTCGGCT GA
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| Protein sequence | MSHPKQPGLY QAFDDVHLID GLRTPQVDHL GAFADANPID LGIHAARAVI ERSGVDATAI
DSVLGGNMAP GGFDQFYLPR HIGLYAGVPV EVPALMAQRI CGTGFELFRQ AGEQIDAGIA
SLALVVGTES MTRHPIAMFD HRGGFKLGQT PALKDYLWES LTDPVAAVSM IQTAENLAQK
YGITRAEVDA FAARSFARAV AAQEAGWFDG EIAPVESSVF ELPGYQPRAL RLSGKNKRAD
RDTHPRPTPA DVLALLRPVF KDGVQTAGNC SALTDAAAAA LVASGVVVRD WQARTGRAPL
ARIAATAVVG VPPEIMGIGP APAIRRLLDG AGLTLDDIAR FEVNEAQGAQ TLAVARELGL
AEDRLNVHGG AIALGHPLAA TGVRLTITVA RQLQAIGARW GVASACIGGG QGIALLVENT
AVG
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