| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0037 |
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| Symbol | |
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| ID | 6160131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 40584 |
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| End bp | 41813 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641662782 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001789078 |
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| Protein GI | 171056729 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.434852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAC CTTCTGCTGA ATCCGTGATG CCCACCGCCA CCTCCGCACC CCAGCCCCTG
GCCGGTCTCC GCGTCGTCGA GTTCACCCAC ATGGTGATGG GCCCGACCTG CGGCATGGTG
CTGGCCGACA TGGGCGCCGA GGTCATCAAG ATCGAGCCGA TCGACGGCGA CCGCACGCGC
CGCCTGCTCG GCGCCGGCTC GGGTTTCTTC CCGATGTTCA ACCGCAACAA GCTGAGCATC
GCGATCGACC TGCACCACGC CGACGGCGCC GAGGTGGCAC GCCGCCTGGC CGCCAGCGCC
GACGTGGTGG CCGAGAACTT CAAGCCCGGC ACGATGGTCA AGTACGGCCT CGACTACGCC
AGCCTCGCCG CCGTCAATCC GCGCCTGATC TACGCCAGCC ACAAGGGTTT CTTGCCCGGC
CCGTACGACC ACCGCACCGC GCTCGACGAG GTGGTGCAGA TGATGGGCGG CCTCGCGTAC
ATGACCGGCC GGCCGGGCGA TCCGCTGCGT GCGGGCACCA GCGTCAACGA CATCATGGGC
GGCCTGTTCG GCGCCATCGG CGTGCTGGGC GCGCTGATCC AGCGTGGCAT CAGCGGGCGC
GGCATGGAGG TGCAGTCGGC GCTCTACGAG AACAACGTCT TCCTGATGGG CCAGCACATG
CTGCAGTTCG CCATGACCGG CAAACCCGCC GCGCCGATGC CGGCGCGCGA GAGCCCGTGG
GCGATCTACG ACGTCTTCAC CGTCAAGGAC GGCGAGCAGA TCTTCCTGGC CGCGGTGAGC
GACGCGCAGT GGTTCACCTT CTGCGATGCG CTCGGTTTTG CCGACCTCAA GGCCGACCCG
GCGCTGGCCA CCAACAACCA GCGCGTGCGC GAGCGCCCCC GCCTGCTGCC GGCCCTGCGC
GAGCGCCTGG CGCTGCGCAG CGCCGCCGAG CTGTCCGACA CGATGGAAGC CGCTGGCCTG
CCGTTCGCGC CGATCCGCAA ACCCGAAGAC CTGCTCGACG ACCCGCACCT GCTCGCCACC
GGCGGCCTGG CCGACATCAC GCTGCCCGAC GGTGCCAAGG CCGGCCAGAG CGTCAAGACC
ACGCTGTTCC CGATCACGAT GGACGGTGCG CGGCTGGGTG TGCGCCTGCA GCCGCCCAGG
CTCGGCGAGC ACACCCGCGG CCTGCTCGAA AGCATCGGCT ACGACCCGGC CCAGATCGAC
ACCTTGCAGG CGAACGCGGT GGTGGTCTGA
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| Protein sequence | MNTPSAESVM PTATSAPQPL AGLRVVEFTH MVMGPTCGMV LADMGAEVIK IEPIDGDRTR
RLLGAGSGFF PMFNRNKLSI AIDLHHADGA EVARRLAASA DVVAENFKPG TMVKYGLDYA
SLAAVNPRLI YASHKGFLPG PYDHRTALDE VVQMMGGLAY MTGRPGDPLR AGTSVNDIMG
GLFGAIGVLG ALIQRGISGR GMEVQSALYE NNVFLMGQHM LQFAMTGKPA APMPARESPW
AIYDVFTVKD GEQIFLAAVS DAQWFTFCDA LGFADLKADP ALATNNQRVR ERPRLLPALR
ERLALRSAAE LSDTMEAAGL PFAPIRKPED LLDDPHLLAT GGLADITLPD GAKAGQSVKT
TLFPITMDGA RLGVRLQPPR LGEHTRGLLE SIGYDPAQID TLQANAVVV
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