| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0030 |
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| Symbol | |
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| ID | 6159826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 33897 |
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| End bp | 35243 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641662775 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789071 |
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| Protein GI | 171056722 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1262] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03440] conserved hypothetical protein TIGR03440 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.434852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCGC AGATCCCTCC CGACCCGCTG GCGCCGACCC CGGCGCCAGC GTCCGAGTCG
CCGGCCGCAC GCCAGGCCCT GCTGCGGCAG ATCCGGGCGG TGCGCGCCCA CACGCTGCAG
CGGGTGGCCA CGCTGTCGGC CGAAGACATG GCCCTGCAGT CCATGGCCGA CGCCAGCCCG
ACCAAATGGC ATCTGGCGCA CACCACCTGG TTCTTCGAGG CGCTGGTGCT GTGCCCGCAC
CAGCCCGGCT ACCAGCCGGT CGACGCGCGC TACTTCAAGC TCTTCAACTC GTATTACGAG
AGCCTCGGCC CGCGCCACCC GCGGCCGCAG CGCGGCCTGC TGAGTCGGCC CTCGCTCGAC
GAGGTGCGGG CCTACCGCAA TGCAGTCGAC CAGGCGCTGG CCCGCTTCAT CGAACAGGCC
GACGACGACA GCTGGGCCGC TGCCGCGCCC TTGCTGCTGC TCGGTCTGCA CCACGAGCAG
CAGCACCAGG AGCTGCTGCT GACCGACATC GCCCACGCCC TGTCGCTCAA CCCGCTGCGG
CCCGCCTGCC TGGCGGACGA ACCGGCGGCA GGTGCCGGCC TGCACGGCGG TGGCGGTGCC
GAGTGGATCG AGTTGCCCCA CGGCGAGATC GGCATCGGCC ACGCCGGCAC CGGTTTCAGC
TTCGACAACG AAACCCCCGC GCACCGCGTG CAGCTGCAGG CCTGTGCGGT GGCGCGTGCG
CTGGTCAGCA ACCGCGACTA CGCCGCCTTC ATCGCCGACG GCGGCTACCG CCGGCCCGAG
CTCTGGCTCA GCGACGGCTG GGCGGCGGTG CAATCGCTGG GCTGGCAGGC CCCGCTCTAT
TGGGCGCTCG ACGAGCGCGG CGCCCCCAGC CACCAGTTCA CGCTCTACGG CGAGCGGCCG
TGGCGCGCCG ACGAGCCGGT CTGCCACCTG AGCTTCTACG AGGCCGCGGC CTACGCCGAA
TGGGCCGGTG CGCGGCTGCC CACCGAGTTC GAGTGGGAGG CCGCGGCCCG CCTCGCCGGC
GGCGCACACG CAGGCGCCGA ACCGGGCGAT GGCCCGATAG ATCCGCAGCC ACGCGCCGCG
TCGCTCGACG CCGCCGGCCG GCGTGACCCC CAGTTCTTCG GCGCCGTCTG GCAATGGACG
CGTTCGTCGT ACGACCCCTA CCCGCGCTTT CGGCCGATGG CCGGCGCGGT GGGCGAATAC
AACGGCAAGT TCATGGTCGG CCAGCTGGTG CTGCGTGGCA GCAGCTGCGC CACGCCGCGC
GGCCATGCGC GGCCGAGCTA CCGCAACTTC TTCCCGCCCA CCGCACGCTG GCAGTTCAGC
GGCCTGCGCC TGGCGCGCGA CCTCTGA
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| Protein sequence | MTPQIPPDPL APTPAPASES PAARQALLRQ IRAVRAHTLQ RVATLSAEDM ALQSMADASP
TKWHLAHTTW FFEALVLCPH QPGYQPVDAR YFKLFNSYYE SLGPRHPRPQ RGLLSRPSLD
EVRAYRNAVD QALARFIEQA DDDSWAAAAP LLLLGLHHEQ QHQELLLTDI AHALSLNPLR
PACLADEPAA GAGLHGGGGA EWIELPHGEI GIGHAGTGFS FDNETPAHRV QLQACAVARA
LVSNRDYAAF IADGGYRRPE LWLSDGWAAV QSLGWQAPLY WALDERGAPS HQFTLYGERP
WRADEPVCHL SFYEAAAYAE WAGARLPTEF EWEAAARLAG GAHAGAEPGD GPIDPQPRAA
SLDAAGRRDP QFFGAVWQWT RSSYDPYPRF RPMAGAVGEY NGKFMVGQLV LRGSSCATPR
GHARPSYRNF FPPTARWQFS GLRLARDL
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