Gene Lcho_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0029 
Symbol 
ID6159825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp33574 
End bp33855 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content64% 
IMG OID641662774 
Producthypothetical protein 
Protein accessionYP_001789070 
Protein GI171056721 
COG category[S] Function unknown 
COG ID[COG2343] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.54022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA TCTGGAAAGA CGTCGTCGTC GCCGAGAGCG ACGACACCGT GCTGGTCGAA 
GGCAACCACT ACTTCCCCGC CGACTCGCTC AAGCGCGAGT ACCTGCTGGC GAGCAACCTG
CGCACCACCT GTTCGTGGAA AGGCCAGGCC AGCTACTACA CGCTGTTCGT CAACGGCGAC
GCCAACCCCG ATGCGGTCTG GTATTACCCC GAGCCCAAGG AAGCCGCCGC GCAGATCGCC
GGGCGGGTGG CGTTCTGGAA GGGTGTGCGG GTGGTCGACT GA
 
Protein sequence
MKAIWKDVVV AESDDTVLVE GNHYFPADSL KREYLLASNL RTTCSWKGQA SYYTLFVNGD 
ANPDAVWYYP EPKEAAAQIA GRVAFWKGVR VVD