Gene Lcho_0026 details

Gene Information

• Locus tag: Lcho_0026
• ID: 6159816
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 31970
• End bp: 32434
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 641662771
• Product: OsmC family protein
• Protein accession: YP_001789067
• Protein GI: 171056718
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1764] Predicted redox protein, regulator of disulfide bond formation

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 0.255995
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCCGAAT TCACCGCCTC CGTGCAATGG CAACGCCATG CCCAGACCTT CACCGACAAC 
CGCTACAGCC GTCGCCATGA ATGGCATTTC GACGGCGGCG CGGTGGTGGC GGGCTCGTCG 
TCACCCCATT CGGTGCCGCT GCCGTATTCC GACCCGGGCG CGGTCGATCC CGAAGAGGCG 
CTGGTCGCCG CGGTGTCGAG CTGCCACATG CTGTGGTTCC TGAGCCTGGC CGCCAAGGCC 
GGCTGGCTGG TCGACGACTA CCGCGACGAC GCCGTCGCCG TGATGGCGCG CAACGCCGCC 
GGCCGCAGCG CGATCACGCT CATCACGCTG AGGCCGGCGG TGCGCTTCGG TGGCGAACGC 
CAGCCCGATG CCGACACGCA ACGGCGCCTG CATCACGCCG CCCACGACGA GTGCACGCTG 
GCGCATTCGG TGACCGCCGA GGTGCGCTGC GAGCCGCTGT TCTGA 

 

Protein sequence

MPEFTASVQW QRHAQTFTDN RYSRRHEWHF DGGAVVAGSS SPHSVPLPYS DPGAVDPEEA 
LVAAVSSCHM LWFLSLAAKA GWLVDDYRDD AVAVMARNAA GRSAITLITL RPAVRFGGER 
QPDADTQRRL HHAAHDECTL AHSVTAEVRC EPLF