Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0023 |
Symbol | |
ID | 6159813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 28902 |
End bp | 29813 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641662768 |
Product | NADP oxidoreductase coenzyme F420-dependent |
Protein accession | YP_001789064 |
Protein GI | 171056715 |
COG category | [S] Function unknown |
COG ID | [COG5495] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.150455 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCACC CGCTCACGAC CCCTTTCAGC CGCGCTGCGC CGCCCTGGCC GCGCACCGCC TTCATCGGCA TCGGTCGCGT CGCGGTGGTG CTGGCCCCGG CGCTCAAGCG GCTCGGCGTG CCGATCGTCG CGCTCGCCAG CCGGCAGGCC ACCGCGGCGC AGCACCTGGC CGGGCAGTTG CACGACGCCG CGGTGCTGAG TGCGCAAGAG GCGGTCGACC GCGCCGAGCT GGTCTGGCTG ACGGTGCCCG ACGATGCCAT CGCGCCCACC ACCGCCGCGC TGCGCTGGCG ACCTGGTCAG ACCGTGGTGC ATTGCAGCGG CGCCACCGAG CTGACGGCCT TGCAGGCCGC GGCCGACGCC GGCGCGGTGG TGGCCGGTTT CCATCCGCTG CAGATCTTTT CCGACCCTGA ACTGGCGGCG CAGCGGCTGG CCGGCAGCAG CGTGGCGATC GAGGCCGGCG GGCCGGCCGA GGCGCTGCTG CAGCGCATCG CCGCCGGCCT GGGCCTGGCG GTGCTGCGCC TGCCGCCGGG CAGCCGCGCG CTCTATCACG CCGGGGCGGC CTATGCCGCG AGCTACCTGC TGGCACTGCT CGACGAAGCC GCGGCGGTCT GGCGCACGCT GGGCATCGAC GAGGCCGCCG CGTTGCGTGC GCTGCTGCCG CTGGCGCACC TGACGCTCGA CGCCGCCGGC CAGCGCGGCC TGGCGCAGGC CCAGGCCGGC CCGATCGCAC GTGGCGACGC CGGCGTGGTG CGGCGCCAGA TCGACGCGCT CGCCGGCATC GGCGCACCGC ACGCCGCGCT CTACCGCGAG ATGGGCCGCC GCCAGCTCGA ACTGGCGCGC CGTGCCGGCC GGCTCGACGC CGCCGCGCTG GCCCGGCTGG CCGCCGCGCT CGGGGTTCAG GACGAGGCCT GA
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Protein sequence | MAHPLTTPFS RAAPPWPRTA FIGIGRVAVV LAPALKRLGV PIVALASRQA TAAQHLAGQL HDAAVLSAQE AVDRAELVWL TVPDDAIAPT TAALRWRPGQ TVVHCSGATE LTALQAAADA GAVVAGFHPL QIFSDPELAA QRLAGSSVAI EAGGPAEALL QRIAAGLGLA VLRLPPGSRA LYHAGAAYAA SYLLALLDEA AAVWRTLGID EAAALRALLP LAHLTLDAAG QRGLAQAQAG PIARGDAGVV RRQIDALAGI GAPHAALYRE MGRRQLELAR RAGRLDAAAL ARLAAALGVQ DEA
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