| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0021 |
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| Symbol | |
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| ID | 6159939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 25922 |
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| End bp | 27445 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641662766 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001789062 |
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| Protein GI | 171056713 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0958186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCAC CCGTCACCCG GACCGCGACC GAGGTCGACA TCGCCTTCCT GCTCGAAGGC
ACCTTCCCGT ACGTGTCGGG CGGCGTGTCG AGCTGGATCA ACACGCTGCT CAAGGGCTTT
CCGGACCTGC GCTTCGCGAT CTACTTCCTC GGCTCGCGGG CGGTCGACTA CGGCGAGATG
CGCTACGAGC TGCCTGCCAA CGTGGTGCAT TTCGAGACCC ACTACCTGTT CGACGGCGAG
GACGCGCCGC CGCTGCGGCC GGTGCGCACC GACCCCGCCG CGTTCGAGAA GGTGCGCTGC
CTGCACCAGC ACTGGCGCGC GCCGCGCACC GCCGACGAAG GTGCCGATCC GCACGGCCTG
TTCGGCGAGG TGGTCGACCA CCTCGGCGAC GCGCTCGGCG AGGCCCATTT CCTGCGCGGC
GACCAGTCGT GGGACTACAT CCGCGAGCAG TACGGCGCGC ACTGCAGCGA CCCCTCGTTC
GTCGACTACT TCTGGACCGT TCGCATGATG CACGCGCCGA TGTGGAAGCT GCACCGCATC
GCCGCGTCGA TGCCGCGGGT GCGCGCCTTC CACAGCGTGT CGACCGGCTA CGCCGGCCTG
CTGGGGGCGA TGTGCAAGCG CCGCTGGGGC CGCCCGCTGA TCCTGTCGGA GCACGGCATC
TACACCAAGG AACGCAAGAT CGACCTGCTG GCGGCGGGCT GGATCGCCGA CAACCGCTCG
GTGCTGCAGC GCGACCCGAC CCAGCTGAGC TACTTCCGCG ACATGTGGAT CCGCTTCTTC
GAGGGCATCG GGCGGGCCTG CTACGACGCC AGCGACCAGA TCATCGCGCT CTACGAAACC
AACCGGCTGC GCCAGGTGCT CGACGGCGCG CGGCCCGAGC GCACCCGCTG CATCGCCAAC
GGCATCTCGA TCCCGACCTT CGGCCCGCTG CGCGCCGAAC GCCCGGCCAC GCCGCCGCCG
GTGCTGTGCC TGATCGGCCG GGTGGTGCCG ATCAAGGACA TCAAGACCTT CATCCGCGCC
ATGCGCACGG TCGTCAACCG CCTGCCCGAG GCGCAGGGCT GGATCGCCGG GCCGACCGAC
GAGGACCCCG ACTACGCCGA GGAATGCCGC CTGCTGGTCA ACAGCCTGGG GCTCGAGAAG
CAGGTGCTGT TCCTCGGTTT CCAGCGCCTG ACCAAGCTGC TGCCGCAGGT CGGCCTGGTG
GTGCTGTCGT CGGTCAGCGA GGCGCTGCCG CTGGTGCTGC TCGAAGGCTT CGCCGCCGGC
GTGCCGGCGG TCAGCACCGA CGTCGGCTCG TGCCGCCAGC TGATCGACGG CCTGCCGGGC
GAGGACGCCT CGTTCGGCCG CGCCGGGCGC ATCGTCGGCA TCGCCGACCC GCGCGCGCTG
GCCGATGCGG CGGTCGAGCT GCTGGCGGAC CCGGCGATGT GGCAGTCCGC CGCCGATGCC
GGCGTGGCGC GTGTCAACCG CTACTACGCG CTCGACACCA TGCTCGACCA CTACGACGAC
GTCTACAAGA AAGCCCTCGA ATGA
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| Protein sequence | MKPPVTRTAT EVDIAFLLEG TFPYVSGGVS SWINTLLKGF PDLRFAIYFL GSRAVDYGEM
RYELPANVVH FETHYLFDGE DAPPLRPVRT DPAAFEKVRC LHQHWRAPRT ADEGADPHGL
FGEVVDHLGD ALGEAHFLRG DQSWDYIREQ YGAHCSDPSF VDYFWTVRMM HAPMWKLHRI
AASMPRVRAF HSVSTGYAGL LGAMCKRRWG RPLILSEHGI YTKERKIDLL AAGWIADNRS
VLQRDPTQLS YFRDMWIRFF EGIGRACYDA SDQIIALYET NRLRQVLDGA RPERTRCIAN
GISIPTFGPL RAERPATPPP VLCLIGRVVP IKDIKTFIRA MRTVVNRLPE AQGWIAGPTD
EDPDYAEECR LLVNSLGLEK QVLFLGFQRL TKLLPQVGLV VLSSVSEALP LVLLEGFAAG
VPAVSTDVGS CRQLIDGLPG EDASFGRAGR IVGIADPRAL ADAAVELLAD PAMWQSAADA
GVARVNRYYA LDTMLDHYDD VYKKALE
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