Gene Lcho_0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0014 
Symbol 
ID6160074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp14798 
End bp15178 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content72% 
IMG OID641662759 
ProductMazG nucleotide pyrophosphohydrolase 
Protein accessionYP_001789055 
Protein GI171056706 
COG category[R] General function prediction only 
COG ID[COG1694] Predicted pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00301608 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGCCC CGCTCGACGT GGCCGGCCTG CAGGCGCGCC TGCGGGTGTT CTCCGACGAG 
CGCGGCTGGG AGCCCTACCA GACGCCCAAG AACCTGGCGA TGGCGATGGT GGTCGAGGCC
GGCGAGCTGG TCGAGATCTT CCAGTGGATG AGCCCCGAGG CCTCGACCCG CGTGGCCGGG
CAGCCCGCCG TGCAGCAGCA CCTGAGCGAG GAAATCGCCG ACGTGCTGGT CTACCTGCTG
CAGATCGCCG ACCGCTGCGG CGTCGACGTG GCGCAGGCGG TCGAGCGCAA GCTGCGGCTC
AACGCCGCCA AGTACCCGGT CGGCCAGGCC AGCGCCTCGC TGGCCGCGGC GCGCCAGCTC
GGCACCGATG AGCCGTCATG A
 
Protein sequence
MSAPLDVAGL QARLRVFSDE RGWEPYQTPK NLAMAMVVEA GELVEIFQWM SPEASTRVAG 
QPAVQQHLSE EIADVLVYLL QIADRCGVDV AQAVERKLRL NAAKYPVGQA SASLAAARQL
GTDEPS