| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0009 |
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| Symbol | |
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| ID | 6160268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 10501 |
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| End bp | 11118 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641662754 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789050 |
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| Protein GI | 171056701 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3108] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000226186 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAGTACC ACCGCCCCCA TCCCCCCGTT CACGCCCACG CGCACGCCCA CGCCCGCCCC
GCCACACGTC GCCGGTTCCT GCGCCATGCG GGTGCGCTGG CGCTGGCTGG TGCCGTGCCG
GTCGCGCTGG CGGCACCGGC CCGCACGAGC GCCGCGACCG GCCTGGGTGG CGCGCGCGAG
CTGGCCCTGC ACCACACCCA CACCGGCGAG CGCATTGCGC TGGCCTATGC GGTCGACGAC
CGCTACGTGC CCGAGGCGCT GGGGGCGCTG AACCACTTCC TGCGTGACCA CTACAGCGGC
CAGGTCGGCA CGATCGCGCC GCCGCTGTTC GACCAGCTGC ACCGCCTGCA CCAGGTGCTC
GGCGCGGCGC AGCCGTTCCA GGTGATCTCG GGCTACCGCT GCCCCGAGAC CAACAACACG
CTGCGCCTGA CCCGCGGCGG CGGCGGCGTC GCCAAGCGCA GCCTGCACAT GGACGGCCGC
GCGATCGACG TGCGCCTGCC CGGCGTGCCA CTGGCCGATC TGCGCGACGC GGCGCTGTCG
CTGGGCGCGG GCGGCGTCGG CTATTACCCG GGCCAGCAGT TCGTGCACCT CGACAACGGC
CCGGTGCGCC GCTGGTGA
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| Protein sequence | MQYHRPHPPV HAHAHAHARP ATRRRFLRHA GALALAGAVP VALAAPARTS AATGLGGARE
LALHHTHTGE RIALAYAVDD RYVPEALGAL NHFLRDHYSG QVGTIAPPLF DQLHRLHQVL
GAAQPFQVIS GYRCPETNNT LRLTRGGGGV AKRSLHMDGR AIDVRLPGVP LADLRDAALS
LGAGGVGYYP GQQFVHLDNG PVRRW
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