| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0001 |
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| Symbol | dnaA |
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| ID | 6160507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 72 |
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| End bp | 1604 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641662746 |
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| Product | chromosomal replication initiation protein |
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| Protein accession | YP_001789042 |
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| Protein GI | 171056693 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0000451615 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCACACGG ATCTGTGGGA GCGAGGCTGC GAGCGTCTGG CCGCCGAGCT GCCCGAGCAG
CAATTCAACA CCTGGATCAG GCCCCTGCCA CCCGCCGACG TCACGCTGGC GGGCGACGGG
GTGCTGGTCG GCTTGCGTGT GCCCAATCGT TTCAAGCTCG ACTGGATCCG CGCGCAATAC
GGTTCGCGCA TCGAGGCCAC GCTCAGCGAA CTGGCTGGCA AGCCGGTGCG CCTGGAGCTT
TCGCTGCTGC CGCGTGATGC GGTGGCGCGT GCCCAGGGCA TGGCGGCGGC GCCTGCGGCT
CAGGCCGGGG CCGCCCCCCA GCCGACGCAA TCGCCGATGG CCATCGGCGC CGCGCTGCAC
GCGGCCGCCA CGGCGCGGCA CGATCCGCAG TCGGTCGTGC CGACACCCGG CGGCAGCGCC
AATGGCCGCG CCGCGCCGCG CGTGGGCGAA CCCGGCGGCC CGGTCGGCAC CAGCACGCTG
CCGGTCGCCC CGACCCTGTC GCCGGCGGTC AGTCGCGGTC GACTCAATCC GGCCCTGACC
TTCGACACCC TGGTGCCCGG CCGCGCCAAC CAGATGGCGC GCACCGCCGC GCTGCACGTG
GTCGGCGCCC CCGGCCACAT GTACAACCCG CTGTTCATCT ACGGCGGCGT CGGCCTGGGC
AAGACCCACC TGATCCACGC GGTGGGCAAT GCGCTGATCC GCGACAACCC CGACGCCCGC
GTGCTCTACC TGCATGCCGA GCAGTTCATC TCCGACGTGG TGCGCAACTA CCAGCGCAAG
ACCTTCGACG AGCTCAAGGC CAAGTACCAC TCGCTCGACC TGCTCTTGAT CGACGACGTG
CAGTTCTTCG CCGGCAAGGA CCGCACGCAA GAAGAATTCT TCAACGCCTT CGAGGCCCTG
CTGGCCAAGC GCGCGCACAT CATCATGACC AGTGACACCT ACCCCAAGGG GCTGGTGGAC
ATCGACGAGC GCCTGACCAG CCGCTTCGAC GCCGGCCTGA CGGTGGCGAT CGAGCCGCCC
GAACTCGAGA TGCGGGTGGC CATCCTGATG AAGAAGTCCG ACGCCGAAGG CAGCCGCATG
CCCGAGGACG TGGCCTTCTT CGTGGCCAAG AACGTGCGCG CCAACGTGCG CGAGCTCGAA
GGCGCGCTGC GCAAGGTGCT GGCCTACAGC CGCTTCAGCC ACAAGGAAAT CAGCATCAAC
CTGGCGCGCG AGGCGCTCAA GGACCTGCTG TCGATCCAGA ACCGCCAGGT CTCGGTCGAG
AACATCCAGA AGACGGTGGC CGACTTCTAC AAGATCAAGA TCGCCGACAT GTACAGCAAG
AAGCGCCCGG CCTCGATCGC GCGGCCGCGC CAGATCGCGA TGTACCTGGC CAAGGAGATG
ACGCAGAAGA GCCTGCCCGA GATCGGCGAG CTGTTCGGCG GGCGTGATCA CACGACGGTG
CTGCACGCGG TGCGCAAGAT CGGCGGCGAG CGCCAGAAGA ACACCGAACT GAATCAGCAG
CTGCACGTGC TCGAGCAGAC GCTCAAAGGC TGA
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| Protein sequence | MHTDLWERGC ERLAAELPEQ QFNTWIRPLP PADVTLAGDG VLVGLRVPNR FKLDWIRAQY
GSRIEATLSE LAGKPVRLEL SLLPRDAVAR AQGMAAAPAA QAGAAPQPTQ SPMAIGAALH
AAATARHDPQ SVVPTPGGSA NGRAAPRVGE PGGPVGTSTL PVAPTLSPAV SRGRLNPALT
FDTLVPGRAN QMARTAALHV VGAPGHMYNP LFIYGGVGLG KTHLIHAVGN ALIRDNPDAR
VLYLHAEQFI SDVVRNYQRK TFDELKAKYH SLDLLLIDDV QFFAGKDRTQ EEFFNAFEAL
LAKRAHIIMT SDTYPKGLVD IDERLTSRFD AGLTVAIEPP ELEMRVAILM KKSDAEGSRM
PEDVAFFVAK NVRANVRELE GALRKVLAYS RFSHKEISIN LAREALKDLL SIQNRQVSVE
NIQKTVADFY KIKIADMYSK KRPASIARPR QIAMYLAKEM TQKSLPEIGE LFGGRDHTTV
LHAVRKIGGE RQKNTELNQQ LHVLEQTLKG
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