Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6014 |
Symbol | |
ID | 6128818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 3212157 |
End bp | 3212933 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641653098 |
Product | extracellular solute-binding protein |
Protein accession | YP_001779625 |
Protein GI | 170738365 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.794278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCCGT TCATCAAGCG GTTCGGCGCG CTGGCCGCCG GTTTCGTCAC CTGTATCGCA CTCTCCACGG CTTCGGCGAG CGCCGTTGCC GCCGAGCCCA CGCTGAAGGT CGGCGCGACG GCCACCGGCG TGCCGTTCAC GTTTCTCGAC GTCAAGAGCA ATTCGATCCA GGGGATGATG GTCGATGCGA TCACGGCGGC CGGGAAGTCG GCCGGGTTTC GCGTCGACGT GCAGCAGACC GTGTTCTCGG CGCTGATCCC GTCGCTCACC ACGCAGAAGA TCGACATCAT CTCGGCCGCG ATGCTGAAGA CGCCGGCGCG CCAGCAGGTC GTCGATTTCT CCGACACCGT CTACTCGTTC GGCGAAGGCC TGATCGTGAA GGCCGACGAT CCGGGCCGCT ATACGTCGAT GGACGATTTC AAGGACCAGG TGGTCGGCGC GCAGGTCGGC ACGGCATTCG TCGATGCGCT CAACAAGAAG GGCATCTTCA AGGAAGTCCG CACCTACGAT TCGATCGCCG ACATCATGCG CGACGTCGCG CTCGGCCGTA TCAAGGCCGG CTTCGCCGAC CAGCCGATCG TCGCGTACCA GATCGAGCAC GGCGTCAATC GCCAGGTGCG GCTGGTGCCC GAATACCAGA GCGTCGTGAA GGGGCAGGTG TGCTTCATCG TGCGCAAGGG TGACAACGCG ACGCTCGAAC AGCTCAACGG CGCGATCCGC AAGATGAAGA GCGACGGCAC GCTGCAGCAG ATCCTGCAGA AGTGGCACAT GAGCTGA
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Protein sequence | MVPFIKRFGA LAAGFVTCIA LSTASASAVA AEPTLKVGAT ATGVPFTFLD VKSNSIQGMM VDAITAAGKS AGFRVDVQQT VFSALIPSLT TQKIDIISAA MLKTPARQQV VDFSDTVYSF GEGLIVKADD PGRYTSMDDF KDQVVGAQVG TAFVDALNKK GIFKEVRTYD SIADIMRDVA LGRIKAGFAD QPIVAYQIEH GVNRQVRLVP EYQSVVKGQV CFIVRKGDNA TLEQLNGAIR KMKSDGTLQQ ILQKWHMS
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