Gene Bcenmc03_5996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5996 
Symbol 
ID6128800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp3195522 
End bp3196259 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content69% 
IMG OID641653080 
Productregulatory protein GntR HTH 
Protein accessionYP_001779607 
Protein GI170738347 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.802632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCCG CGCGTCCCGA CACACTCGAA GGCGGTTTCA GGCCGCTGCA GATCTACGAG 
CAGGTAGCCG AAAAGATCCG CGACGAGATC CGCGCGGGGC GCTATGCGGC CGAGTCGCGG
CTGCCGTCCG AGCGCGAACT CGCGGCGCTG TTCCAGGTCG GCCGGCCGGC CGTGCGCGAG
GCGCTCGGCG CGCTGCAGAA CGAAGGGCTC GTGTTCACGA AGCGCAATTC GGGCACCTAC
GTCGTCGCGG CCCCGCTCGA GGTGCTGGCG CAGCGCGGCG ACGCGCACGC GGCGTTGGAG
GCCGACTTCA GCCCGACGTC GACGCTCGAC GTGCGGCTGA TCCTGGAGCC CGCGATCGCG
CGCCTCGCGG CCGCCCATGG CCGCGCCGAC CCCGGCGCCG AACGCTATCT CGCGCAGATG
GAAACCATCA CCGACGTCGA CGACCCGCAC CAGCGCGCGC TGTGGAACGA GAGCGACCGG
CTGTTCCACC GGCAGCTCGC GCTGATGACC GGCGACGCGT TGATCGTGAA GATCGCGGAC
GAAGTCGCGA AGACGATGGA TCAGCCGTTG TGGAAGCGGC TGAAGGACGA CGGCATCTAC
GACGCGGGCC GGATCAGGCT CTACGTGTCC GAGCACCGGT TGATCTACGA GGCGATCGTC
TCCGGGGATG CCGATGCGGC TGCGTTCTAT GTCGAACAGC ACATCCGCCG CGTGCGGCGC
GACATTGCGC CGAAGTGA
 
Protein sequence
MMSARPDTLE GGFRPLQIYE QVAEKIRDEI RAGRYAAESR LPSERELAAL FQVGRPAVRE 
ALGALQNEGL VFTKRNSGTY VVAAPLEVLA QRGDAHAALE ADFSPTSTLD VRLILEPAIA
RLAAAHGRAD PGAERYLAQM ETITDVDDPH QRALWNESDR LFHRQLALMT GDALIVKIAD
EVAKTMDQPL WKRLKDDGIY DAGRIRLYVS EHRLIYEAIV SGDADAAAFY VEQHIRRVRR
DIAPK