| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5977 |
|---|
| Symbol | |
|---|
| ID | 6128781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 3171917 |
|---|
| End bp | 3172327 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641653061 |
|---|
| Product | transport-associated |
|---|
| Protein accession | YP_001779588 |
|---|
| Protein GI | 170738328 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.663122 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCAA CGGAACACAC GCGGCACGAC CGCACCGGCG GCAAGCCGGC GCGCACGCGA
CACAGGACGC CGGTCGTGCC GATCGCGAGC ATACTGATGC TGTCGTGTGC ATGGATCGCG
ACACCCCGCT ACGCATCGGC CGAGGAGGGC ACGCGTGCGA AGCTCGCCAG CCAGGCGTCG
GCCGTCGGGG GCCAGATCCG CGATGCGACG CTCGCGTCCC GTGTCAGGGC CGCGCTCGTC
GCCGAACGCG GCCTGGCCTC AGGCGACATC GACGTGCAGG TGCGCGACCG CGTGGCCGAA
CTGACGGGCA ACGTGCCCGA CGAGCGGCAA CGCGCGACCG CGATCCGCGT CGCGCACGAC
GTCAGCGGCG TGAGCGGCGT GCGCGACAAG CTGCAGATCC GCCGGAAGTA A
|
|---|
| Protein sequence | MDATEHTRHD RTGGKPARTR HRTPVVPIAS ILMLSCAWIA TPRYASAEEG TRAKLASQAS
AVGGQIRDAT LASRVRAALV AERGLASGDI DVQVRDRVAE LTGNVPDERQ RATAIRVAHD
VSGVSGVRDK LQIRRK
|
|---|
| |