| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5965 |
|---|
| Symbol | |
|---|
| ID | 6128769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 3161972 |
|---|
| End bp | 3162745 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641653049 |
|---|
| Product | IclR family transcriptional regulator |
|---|
| Protein accession | YP_001779576 |
|---|
| Protein GI | 170738316 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAAA AGCCCGACCT CGACCGACGC GACTGGATTG CCGGCCTCGA AAAAGGCCTG
ATGATCCTGG AGGCATTCGA TAGCCAGCAC GCGCGCATGA CGCCTACCCA GGCCGCCGCG
CGCACCGGCC TCACGCGCAC GGCCGCGCGG CGCTACCTGC TGACGCTGGA GTCTCTCGGC
TACGTGTACA CCGACGGCAA GCTGTACAGC CTCACGCCGC GCGTGCTGCG GGTCGGCTGG
TCGTACTTCG ATTCGGCGCG GTTGCCGCGC ACGGTCCAGC CTTATCTGCA GCAACTGAGC
GCATCGCTGA ACGAATCGGC GTACGTCAGC GTGCTCGACG GCTGGGAGCT CGTGTTCATC
GCCCGCAACG GCGTGTCGCG CGTGATGACG ACGGGCTTCG TGCTCGGCGC GCGCGTGCCG
GCACCATTGA CGTCGCCCGG CGTCGTGCTG CTCGCCCATC ATCCCGATCG CGAAGCCGTG
CGCGCGTGGC TCGACGAGAC CGAGCTGCCG CCGTTCACGC CGCACACGAT CACCAACAAG
GCGCGGCTGC TCGAACAGGT CGACCAGGCG CGCGACGCCG GCTACGCGGC GATCGAGCAG
CAATTGCAGG TCGGCGTACG CGGGATCGCG GTGCCGCTGA AGAACCGTCA CGGCGAAGTC
GTCGCCGCGC TCAGCACGAA CATGCCGATC GGCGCGGAGA CGACCGACGC GGCCGTGCGG
CGCGTGCTGC CGCATCTGCA GGAAGCCGCG CTCGCGATGC TCAACGTGCT GTAG
|
|---|
| Protein sequence | MTKKPDLDRR DWIAGLEKGL MILEAFDSQH ARMTPTQAAA RTGLTRTAAR RYLLTLESLG
YVYTDGKLYS LTPRVLRVGW SYFDSARLPR TVQPYLQQLS ASLNESAYVS VLDGWELVFI
ARNGVSRVMT TGFVLGARVP APLTSPGVVL LAHHPDREAV RAWLDETELP PFTPHTITNK
ARLLEQVDQA RDAGYAAIEQ QLQVGVRGIA VPLKNRHGEV VAALSTNMPI GAETTDAAVR
RVLPHLQEAA LAMLNVL
|
|---|
| |