| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5949 |
|---|
| Symbol | |
|---|
| ID | 6128753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 3143737 |
|---|
| End bp | 3145041 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641653033 |
|---|
| Product | gluconate 2-dehydrogenase (acceptor) |
|---|
| Protein accession | YP_001779560 |
|---|
| Protein GI | 170738300 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.275687 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.160447 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATATC TCACCCTGAA CCTGAACACG CTCCGCGCGT CGCTGTTCGC GCTGTCCGCA
CTGGTGCTCG GCACGGCTGC GCATGCCGCG CAGACGGCGC CCGCCGACAG CGCGCTCGTT
GCCCGCGGCG CCTATCTGGC AAAAGCCGGC GACTGCGTCG CGTGCCACAC CGCGCCGCGC
GGCACGCCGT TCGCGGGCGG CCTGAAGATG GTCACGCCGA TGGGCGCGAT CTACACGACC
AACATCACGC CCGACCCGGA GACGGGCATC GGCGGCTATA CCGAAGCGGA TTTCGCCAGC
GCGTTGCGCA AGGGCGTCGC GAAGGACGGT CACAACCTGT ATCCGGCGAT GCCGTATCCG
TCGTACGCGA AGCTGAAGGA CGACGACGTG AAGGCGCTGT ATGCGTACTT CATGCACGGC
GTCGAACCGG TGAAGCAGGC GAACCGGCCG TCCGACATCC CGTGGCCGCT CAACATGCGC
TGGCCGCTCG CGTTGTGGAA CGCGGTGTTC CTCGACACGA CGCCGTACGC GGACAAGCCG
GCCAAGGACG CGATGTGGAA CCGCGGCGCG TATCTCGTGC AGGGGCTCGG GCACTGCGGG
TCGTGCCATA CGCCGCGCGG TGTCGGCTTC CAGGAGAAGG CGCTCGACGA AAGCGGCGCG
GCGTTCCTGT CCGGCGCCGC GATCGACAAC TGGTTCGCGT CGAACCTGAC CGGCGAGCAC
AACACCGGGC TCGGGCGCTG GAACGAGGCA GACGTCACGC AGTTCCTGAA GACCGGCGCG
AATCAGCACG CGACCGCGTT CGGCTCGATG GTGAGCGTGA TCAACCACAG CACGCAGGAA
CTGACCGACG ACGATCTGGC CTCCATCTCG CGCTACCTGA AGTCGCTGCC GGCGACAGGC
GGCACGGGCG CACCGCCGTA CCGCTATGAT CCGAAGGCGA CGCAGGTCGC GCTGGGCCGG
CCGGCAGCCG ATCCGGGCGC GAAGGTGTAT AACGCTTACT GCCTGCATTG CCACGGCGTG
GACGGCCGCG GTTATGCGCC GCTGCTCGCG CCGCTCGCCG GCAATCCGAA CGTGCTCGAG
GCCGATGCGT CGTCGCTGAT CAACGTGACG CTGAACGGCA GCGACACGCT CGTGATCGGT
GGCGTGCCGT CCGCGTATCC GATGCCGGCG TTCTCGAACC AGTTGAACGA CCAGCAGGTC
GCCGACGTGC TGACGTTCAT GCGCGCCGGC TGGAACAACG GCGCGCCGGC CGTGCAGGCG
GCGGACGTCG CGAAACTCCG CAAGGCGACG GCGGCCGCGC ACTGA
|
|---|
| Protein sequence | MRYLTLNLNT LRASLFALSA LVLGTAAHAA QTAPADSALV ARGAYLAKAG DCVACHTAPR
GTPFAGGLKM VTPMGAIYTT NITPDPETGI GGYTEADFAS ALRKGVAKDG HNLYPAMPYP
SYAKLKDDDV KALYAYFMHG VEPVKQANRP SDIPWPLNMR WPLALWNAVF LDTTPYADKP
AKDAMWNRGA YLVQGLGHCG SCHTPRGVGF QEKALDESGA AFLSGAAIDN WFASNLTGEH
NTGLGRWNEA DVTQFLKTGA NQHATAFGSM VSVINHSTQE LTDDDLASIS RYLKSLPATG
GTGAPPYRYD PKATQVALGR PAADPGAKVY NAYCLHCHGV DGRGYAPLLA PLAGNPNVLE
ADASSLINVT LNGSDTLVIG GVPSAYPMPA FSNQLNDQQV ADVLTFMRAG WNNGAPAVQA
ADVAKLRKAT AAAH
|
|---|
| |