| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5944 |
|---|
| Symbol | |
|---|
| ID | 6128748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 3138160 |
|---|
| End bp | 3138774 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641653028 |
|---|
| Product | integrase, catalytic region |
|---|
| Protein accession | YP_001779555 |
|---|
| Protein GI | 170738295 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.656636 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0902484 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCAA CGGAACGGAT CACGATGACG ATGCGCGAAC TGGACAGGTT CAAGGTCATT
CAGGACGTGG CGGACGGCAA GCTCAAGCCA TGGCGTGCGG CAGAACGGCT GGAGCTGACG
ACCCGGCAGG TTCGCCGGCT GGTCGCCAGG CTGCGGGAGC ACGGGCCTCA AGGTCTCGTG
TCGGGACGGT ATGCGAAGCC AAGCAACAAC CGGCTGGACG CGGTAATTGT GGACCGGGCG
CTGTCGATCA TCCGCGATCG CTACGCCGAT TTCGGGCCGA CGTTGGCCTG CGAGAAGCTC
TGGGAGTGTC ACGGCATTGG GCTGGCCAAG GAGACGGTCA GGAAGCTGAT GACGGACGCT
GGGCTCTGGA TTCCGCGCCG GCAACGACCG CCGAAGGTCT ACCAGCCGCG AGCGCGTCGG
GCGTGTCTGG GCGAACTGAT CCAGATCGAC GGCAGCGATC ATCGGTGGTT CGAGGAACGG
GCACCGGCCT GCACGCTGCT GGTGTACGTC GACGACGCGA CGAGCCGGTT GATGATGCTG
CACTTCACGC AGACCGAATC GACCTTCAGC TACTTCGATA CTCCAAGAAT TTCGCCGCCC
CCCCCTTTCC GCTAA
|
|---|
| Protein sequence | MAATERITMT MRELDRFKVI QDVADGKLKP WRAAERLELT TRQVRRLVAR LREHGPQGLV
SGRYAKPSNN RLDAVIVDRA LSIIRDRYAD FGPTLACEKL WECHGIGLAK ETVRKLMTDA
GLWIPRRQRP PKVYQPRARR ACLGELIQID GSDHRWFEER APACTLLVYV DDATSRLMML
HFTQTESTFS YFDTPRISPP PPFR
|
|---|
| |