| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5936 |
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| Symbol | |
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| ID | 6128740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 3130754 |
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| End bp | 3131617 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641653020 |
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| Product | YscJ/HrcJ family type III secretion apparatus lipoprotein |
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| Protein accession | YP_001779547 |
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| Protein GI | 170738287 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0650117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCC GGATCCGGAT CGTCGGCCGC GCGAGCGTGC ATGCGTGCGT GGTGTTGTGC
GTCGCGCTGT GCATCGCGCT GGCCGGCTGC AAACAGGAAC TCTATGGAAA CCTCAGCGAG
CAGGACTGCA ACGAGATCGT CGCGGCGCTG CTGCAGGCGG GCATCGACGC GAAGAAGGAG
AGTGCGGACG GCGGCAAGAC GTGGAGCGCC AAGGTCGACG ATGCACACAT CGTGCAGGCG
ATGAACGTAT TGCGCGAGCA TGGCCTGCCG GCGCACAAGT ACGACGATCT CGGCGATCTC
TTCAAGAAGG ACGGCCTCGT GTCGACGCCG ACCGAGGAGC GCGTGCGCTT CATCTACGGG
GTGTCGCAGG AGCTGTCGAA GACGCTGTCG CAGATCGACG GCGTGATGGT CGCGCGCGTG
CATATCGTGC TGCCGGACAA CGATCCGCTT GCGATGCACG TGAAGCCGTC GTCCGCGTCG
GTATTCATCA AGTACCTGCC GACGGCGAAT CTCGCGATGA TCGAACCACA GATCAAGAAC
CTCGTGGTCC ACAGCGTCGA AGGATTGTCG TACGACAAGG TCAGCCTGAC CGCCGTCGCC
GGCAGCCCGC TCGACGTGAT GCCGCGCGCG CCGTCCGGCG GCGGGGCGTG GCGCACGATC
GCGATTGCCG GATGCGTCCT CGCGGTGCTC GCGCTGCTCG TCGTCGTGGC GCGCAAGCGA
GGCCCGCGCG CGAATGGCGT CGACACGCCC GAGGCGTCCG GCGCGCCGGG CGCGCCCGGT
GGACCGGCGG TGGGCAGCCT GGCGGCGAAG CTGTCGGTGG GCCCGTTCCG AGGCAAGCCG
GCCGGCGACG GCGCGGGGCG CTGA
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| Protein sequence | MNARIRIVGR ASVHACVVLC VALCIALAGC KQELYGNLSE QDCNEIVAAL LQAGIDAKKE
SADGGKTWSA KVDDAHIVQA MNVLREHGLP AHKYDDLGDL FKKDGLVSTP TEERVRFIYG
VSQELSKTLS QIDGVMVARV HIVLPDNDPL AMHVKPSSAS VFIKYLPTAN LAMIEPQIKN
LVVHSVEGLS YDKVSLTAVA GSPLDVMPRA PSGGGAWRTI AIAGCVLAVL ALLVVVARKR
GPRANGVDTP EASGAPGAPG GPAVGSLAAK LSVGPFRGKP AGDGAGR
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