| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5921 |
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| Symbol | |
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| ID | 6128725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 3118053 |
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| End bp | 3119588 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641653005 |
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| Product | type II/III secretion system family protein |
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| Protein accession | YP_001779532 |
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| Protein GI | 170738272 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0561262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTGC ATCTCGCGTG CGGCGAACCC GAGCCGGCCG CGCCGGCACC CCGGCCCGCA
CCGGCATCGG CCGTGTCCGC GCCGGCGGCG ACCGCGCCGC CGCATGCGCG CCGCACGACG
CGCGGGCACT CCGCCGGCAA GGCGGCCAGC GACACGCGTG CTGTGGCGCC GCCGCCGCGA
CGCAGGTCGC CCGACTGCCG CGCGCATGCG TGTGCGCTGC CCAACATGCC GCCGTGGTCG
TCCGCGCCGT ACCGCTATTC CACCAGCGGC GCATCGCTGC CGGACACGCT GCGTGCGCTG
TCCGCCGCGA CGCATGTGCC GATTGCGTTC GATGCGGGGC TGCCGGGCCG CGTCGAAGGG
CGCTTCGAGC TGCCGCCGCA GCGCTTCGTC GAGATGCTCG CGCACGGGTA CGGGCTCGTC
TGGTATTACG ACGGCACGGT GCTGCACGTC GATGCGGCCG GCACGCAGAC CACGCTGATC
GTCCGGCTCA ACTACGCCCG CCCGACGGAC CTGCATGCAT TGCTCGCGCA GACCGGCATC
GACGACGTGC GGTTCGTCGC GCGCGACGAT GCGCCGGCCC GCGGCCTCAT CACGTTTCGC
GGGCCGCCGG CGTGGATCGC GCTCGTGGGC CGCGCGGCGC AGCGACTCGA CGCCGACGCG
CGTGCGCGCG TGAAGACGGC GGTGCGCATC GTGCCGCTCC ACTATGGCAA CGCGGCGGAC
CGCTCGGCGT TCGCGAACGG GCGAAGCAAC GTCGTGCAGG GCGTCGCCAG CCGAGCGGCG
CGCGTGCTCG ATCCCCACGA CAGCCTGCGC GCGACCATCA CCGAATACGA GGCGCCGCTG
CCGGTGCTCG GCGCCGATGC GGGCACGAAC GCGGTGCTGG TGCGCGACCG GCCCGAGCGG
CTCGACGCCG ACGTGCGGGC GATCATCGCG CTCGACCGGC CCCGGCAGCA CGTCGGCCTC
GGCCTGCTGG TGGCCGAAGT CGATACGGAT GCGCTGGGCG CGATCGGGCT CGGTGCACCG
GGCGCCACGG TGATGCGCGC CCGCGCGGCG CGCAACCTGG GCGCCGCGCT ACGCGGCACG
CCAGGGGTGC GCATGCTGAC CGACAGCGCG CTTCAGACGG ACGACGGCGT GGCCGTTGCA
TGGGAACGGC ACGCCGAACA ACCGGTCGCG CCGACGGGCG GCCAGCGGGA CACGGCCGCA
TCGGACGGCA CGGCCGCGGC CGCAGTGGCG GCCTCTGATC CGGGCCCGGC CACGGACGAC
GCGTTGCGCA TCGTGCCGGC GCTCGACATG CGAACCGATC CGCCCCGTGT GGTGCTGGCC
GTCGAATGGC GCGGTGCGAC GATCGACGTC GCGCGTGCGT CGATCGGGCC GGGCGAGATG
CTCGCGATGG TGGAACCCGG TGCGTCCGCG CCGGCCGCCG GGCATGGGGC GATGCGGGTG
ATTTTGCTCG CGCCGCATCC GGTCGACGGC TGTGCGTCGC TCGCCGATAC GGGTGAAAGG
GCGCCGCCCG GTCAGCCGGC CGCGGCGTGC CGATGA
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| Protein sequence | MLLHLACGEP EPAAPAPRPA PASAVSAPAA TAPPHARRTT RGHSAGKAAS DTRAVAPPPR
RRSPDCRAHA CALPNMPPWS SAPYRYSTSG ASLPDTLRAL SAATHVPIAF DAGLPGRVEG
RFELPPQRFV EMLAHGYGLV WYYDGTVLHV DAAGTQTTLI VRLNYARPTD LHALLAQTGI
DDVRFVARDD APARGLITFR GPPAWIALVG RAAQRLDADA RARVKTAVRI VPLHYGNAAD
RSAFANGRSN VVQGVASRAA RVLDPHDSLR ATITEYEAPL PVLGADAGTN AVLVRDRPER
LDADVRAIIA LDRPRQHVGL GLLVAEVDTD ALGAIGLGAP GATVMRARAA RNLGAALRGT
PGVRMLTDSA LQTDDGVAVA WERHAEQPVA PTGGQRDTAA SDGTAAAAVA ASDPGPATDD
ALRIVPALDM RTDPPRVVLA VEWRGATIDV ARASIGPGEM LAMVEPGASA PAAGHGAMRV
ILLAPHPVDG CASLADTGER APPGQPAAAC R
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