| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5917 |
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| Symbol | |
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| ID | 6128721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 3112407 |
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| End bp | 3114011 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641653001 |
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| Product | type IV prepilin |
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| Protein accession | YP_001779528 |
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| Protein GI | 170738268 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.136349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0238074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCAT CACGGAAACG TCAGCGCGGC TTCACGATCG TGGAGATGCT CGCGGCCCTC
GCCATCGCAT CGCTGATGAT CGTCGGCGTC ACGGCGATGA TCGATACTTC CCTCGCGGAC
GCGAAGGGGC AGCAGGCGGC GGCCTGGCAG GCGCAGATGA CACAGGCCGC CGCGCAGCTG
ATCACGCAGA ACCAGAGCGC GCTCGCGAGC GCGGCCACGC CGACCGTGCC GGTCGTCGTG
CCGCTCGCGG GCGGCGGCTA CCAGCTCGCG CGCTATCTGC CGCCCGGCGT GTCCGGCAAG
AACGCGTATG GGCAGACGCC GTGTCTGCTG GTCTACGGCA TCGACGCGAC GACGGTGCAG
GGGTTGCTCG TGACCGAGGG CGGCACGACG ATCGGCGACG TGCAGCTCGG CTACATCGCG
GCGAATGCGG GCGCGGGCGG CGGCTCGATT CCGCGCACGA ACAATGCGGC CGGCGCGGCG
TTCGGCGCAT ACGGTGCGTG GAGCATCGCG ACACCGAACC CGTCGCGCAA ATCGTGCTCG
GGCAACGCGA CCGGGTTCGG CCATCTCGTG AACCAGGTGT TTCCGGCCAA CGCACAGGCG
CAGAACGGCG ATTTCCTCTA TCGGGTCAGC GTGCCGGGCA ATCCCGCGCT GAACACGATG
CAGGTGCCGG TCACGCTCGC GCAGCAGCAG GACTACGCCG CCTGTACGTC CGCGACGGGC
TCGATCGCGG CGGATGCGTC GGATCATGTC GTCACCTGCA GCGGCGGCAT GTGGAAACCG
ATCACGTCGC TGCACTGGCG CGACCCGGTC GCGTCGGCCG CGGCGCTCGG CAGCCTGCCT
AATCCGCTGC CGGGCGACGT CGCGGTGACG CTGGCCACCG GCCGCGCCTA TACGTTCAAC
GGCACGGCGT GGCAGGCGCT CGCGGTCAAC GAGGCCGGCT ATCTCGACCT CGGCAACGGG
CAGGCGGTCG GCGCTCCGTG CGCGCAGGAC GAGGCGAACA CGACGCCCGT CACCACCGAT
GCGTCGGGCC GTGTGCTGTC GTGCCGCGAC GGTACGTGGC AGACGCAGGC CGAAATCGAA
CCGGTCACGA ACCAGACGGG CTGCACGATC CTGATGGCGT CGCCGAACGC GACCGACTAT
GCGGGGTGCG GCAGCGTGCC CGGCGGTGCG TGGTCGAGCG GACCGTTCAC CTACAACGGC
GCGAACGGCA CTTATTCGTA CTACTACTAT GTGCCGGTGA CGATGGCCAA GCCGGGCATC
ATCGCCGTGA CGACCTGGGG GCACCTGAAC GACGGCGTGA GCACCGGCAA GCGCGGCGCG
CAGGCGCAGC TGTCGCAGGC CGTCGACGTG ATGAACGATG CGCTCTCGGC GAGCTACGGC
CATACCGAGG CGCAATCGCC CACGCTGATC GACGATTCGG GCGGCATCAC GACGTCGCTC
ACGCAAGCCG TGAAGCCGGG CACGTACCGC GTACGCATCG TCACGAGCTG GGCGACCTAC
GCCGTCATCA CCACGCCGTG GACCAGCAGC CTGCTCGGCC AGCAGAACCA GGCGATTCCC
AATACGCCCG TCGTGCACGG ATGGACGATC AATACCTACT ACTGA
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| Protein sequence | MSPSRKRQRG FTIVEMLAAL AIASLMIVGV TAMIDTSLAD AKGQQAAAWQ AQMTQAAAQL
ITQNQSALAS AATPTVPVVV PLAGGGYQLA RYLPPGVSGK NAYGQTPCLL VYGIDATTVQ
GLLVTEGGTT IGDVQLGYIA ANAGAGGGSI PRTNNAAGAA FGAYGAWSIA TPNPSRKSCS
GNATGFGHLV NQVFPANAQA QNGDFLYRVS VPGNPALNTM QVPVTLAQQQ DYAACTSATG
SIAADASDHV VTCSGGMWKP ITSLHWRDPV ASAAALGSLP NPLPGDVAVT LATGRAYTFN
GTAWQALAVN EAGYLDLGNG QAVGAPCAQD EANTTPVTTD ASGRVLSCRD GTWQTQAEIE
PVTNQTGCTI LMASPNATDY AGCGSVPGGA WSSGPFTYNG ANGTYSYYYY VPVTMAKPGI
IAVTTWGHLN DGVSTGKRGA QAQLSQAVDV MNDALSASYG HTEAQSPTLI DDSGGITTSL
TQAVKPGTYR VRIVTSWATY AVITTPWTSS LLGQQNQAIP NTPVVHGWTI NTYY
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