| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5909 |
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| Symbol | |
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| ID | 6128713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 3103860 |
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| End bp | 3105539 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641652993 |
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| Product | type IVB pilus formation outer membrane protein |
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| Protein accession | YP_001779520 |
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| Protein GI | 170738260 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02520] type IVB pilus formation outer membrane protein, R64 PilN family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.918767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0245572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCATC TCGCGATCAC TCTCGCGCTC GCCGCGACCC TGACGGGCGG CTGTACCGGC
CTGTCGGAGA AATTGTCCGC CGCCGTCGAC CACGATCACG CGCAGTCGCA GCACGCGATC
GATGCCGCGT TTGCCGGCGA CGTTCGCCCG CGCTCGGGCG CCGACAGCGT GATCGTCAAG
GATACGCTGT GGCTGTCGGG CACGACGATC AAGCTGAATC ATGCGGACGT CCTGCCGCCG
GTGTTCCTGC AGCCGGCCAC CTTCGACAGC GACGTCGGCT CGCTGGCCGA ATTCTCCGAG
CGCATTTCGC GGCTCACGCA TATCCCGACG CGCGTCTCGC CGAACGCGAC CGGCGATGCG
CCGGCGAGCG CCCGCGGCAT GTCGACGCCG GTGCTCGGCA ACGTGCCGCC TCTGCCGCCG
CTGCCGACGT TGCCGGGGCT CGACGGGTCG CGCGGCGGCG CGGCCGGCGC GAATGCGATC
GCAGGCCTCG CGGCGCCGAC CCACATTTCG TATCGGCATG GCGACCTGCG CGGCCTGCTC
GATGCCGCCG CCGCGCGCTT CGGCGTCTCG TGGAAGCTGG TGAACGGCGC GATCCTGTTC
TATTTCACCG ATACGCGCAC GTTCCAGGTC AACGCGATTC CGGGCGACGC ATCGGTCGAC
GCGCACGTGA TGAGCGGCGC GACGAGCGAC AACCTCGGAG GCGGCAACAC GTCGGCGGGC
GGCTCGGGTT CGAATTCGAA CCAGCCGAGC GTATCGGCCA CCAATACGGC CAACACGGTG
GTCAACTCGC AGCTGTCGGT GTTCAACAGC CTGAGCGCGT CGATCAAGGC GATGCTGTCA
CGCTATGGCG GCGTGGTGTC GTCGCCGGCG ACCGGGTCGA TCACGGTCAC CGACACGCCG
GACGTGCTCG ACCGCGTCGG GCAGTTCATG GAAGCGCAGA ATCGCTCGCT GTCGAAGCAG
GTGCTGATCG ACGTGACGGT GCTGTCGGTC GACCTGTCCG ACGACGACAG CTACGGCATC
AACTGGCGCG CCGTCTACCA GGCGCTCGGC ACGTCGTTCT CGCTCGCGAA CACGTTCTCG
ACGACCGCGA CCAATCCGGT CTCGTTCACC GCGCAGGTGA TCACGCCGAA CAGCCGCGCG
TCGGGCACGC TCGCGATGAT CAGCGCGCTG TCGCGCCAGG GCAAGGTGCG GCGCAAGACC
TCGGCGTCGA TCACGACGCT CAATGATCAG CCGGTGCCGG TGCAGGTGGC GACCCAGCAG
GGCTACCTGG CGTCGGTATC GACGACCAAT ACCGCGAACG TCGGCTCGCA GACGGCGCTG
ACGCCCGGCA CCGTCACGAC CGGGTTCAAC ATGACGCTGC TGCCGCACGT GCTCGACAAC
GGCACGGTCC TGCTGCAGTT CTACACGAAC ATCTCGGCGC TGCTGGAGCT GAAAACCATC
GAGAGCGGCG GTCAGAAAAT CCAGACGCCG CAGATCGACA CGCGCAATTT CCTGCAGCGG
GTATCGATGA AATCGGGGCA GACGCTGGTG CTGAGCGGTT ACGAGGCATC CAACGACAAC
CTCACGAAGT CGGGCATCGG CACGCCGAAC AATTACGCGT TCGGCGGCGG ATACGACGGC
GCTCGCGACC GCCAGGAAAT CGTGATCCTG ATCACGCCGA TCATGATGAA CGGCGCCTGA
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| Protein sequence | MRHLAITLAL AATLTGGCTG LSEKLSAAVD HDHAQSQHAI DAAFAGDVRP RSGADSVIVK
DTLWLSGTTI KLNHADVLPP VFLQPATFDS DVGSLAEFSE RISRLTHIPT RVSPNATGDA
PASARGMSTP VLGNVPPLPP LPTLPGLDGS RGGAAGANAI AGLAAPTHIS YRHGDLRGLL
DAAAARFGVS WKLVNGAILF YFTDTRTFQV NAIPGDASVD AHVMSGATSD NLGGGNTSAG
GSGSNSNQPS VSATNTANTV VNSQLSVFNS LSASIKAMLS RYGGVVSSPA TGSITVTDTP
DVLDRVGQFM EAQNRSLSKQ VLIDVTVLSV DLSDDDSYGI NWRAVYQALG TSFSLANTFS
TTATNPVSFT AQVITPNSRA SGTLAMISAL SRQGKVRRKT SASITTLNDQ PVPVQVATQQ
GYLASVSTTN TANVGSQTAL TPGTVTTGFN MTLLPHVLDN GTVLLQFYTN ISALLELKTI
ESGGQKIQTP QIDTRNFLQR VSMKSGQTLV LSGYEASNDN LTKSGIGTPN NYAFGGGYDG
ARDRQEIVIL ITPIMMNGA
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