Gene Bcenmc03_5903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5903 
Symbol 
ID6128707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp3097624 
End bp3098331 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content68% 
IMG OID641652987 
ProductABC transporter related 
Protein accessionYP_001779514 
Protein GI170738254 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.451003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.216806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGA TTGCGCTCGA CGTGAACGCG GTCACGAGCG GCTATCGCGA TGCGATCGTG 
CTGCGCGGCC TGACGATGCG CGTCGCCGCC GGCGAGGCGG TGGCGCTGCT CGGCAAGAAC
GGCATGGGCA AGACGACGCT GCTGAAGACC ATCATGGGCT ACCTGCCCAA GACGGGCGGC
TCGATCCATG CGCACGGCGC GGACATTACG CGGCTGCCGC CGCACCGGAT CGCGCGTGCG
GGGATCGCCT ATGCGCCGCA GGAGCACGCG CTGTTCCACG ACCTGAGCGT GCGCGACAAC
CTGCGGCTCG GACTGGCGCA GGCATCGACG TTCGACGAAC GTTTCGCCGA GATCGAACCG
GTGTTTCCGG TATTCGCGAG CCGGCTGAAG CAGTACGCGG GGACGCTGTC CGGCGGCGAG
CAGAAGATGC TGCTGGTGGC GCGCGCGCTG ATGATGCGGC CGTCGACAAT CCTGCTCGAC
GAAATCACCG AGGGCCTGCA GCCGTCGGTG ATCGACCGGC TCGCCGACGT GTTGCTGTGG
GAGCGCGAGC GCCGCGGCAC GACCTTGCTG CTGATCGAGC AGAACGTGCC GTTCGCGCTG
AAGGTCGCCG ATCGCTATGC GGTGCTGAAG CAGGGCGCGC TAATCGACGA CGGCGATGCG
AAGGCGCCGT CGGCTGCCGC GTCGGTCTTC GCGCACCTGC GGGTCTAG
 
Protein sequence
MSGIALDVNA VTSGYRDAIV LRGLTMRVAA GEAVALLGKN GMGKTTLLKT IMGYLPKTGG 
SIHAHGADIT RLPPHRIARA GIAYAPQEHA LFHDLSVRDN LRLGLAQAST FDERFAEIEP
VFPVFASRLK QYAGTLSGGE QKMLLVARAL MMRPSTILLD EITEGLQPSV IDRLADVLLW
ERERRGTTLL LIEQNVPFAL KVADRYAVLK QGALIDDGDA KAPSAAASVF AHLRV