Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5902 |
Symbol | |
ID | 6128706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 3095777 |
End bp | 3097627 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641652986 |
Product | ABC transporter related |
Protein accession | YP_001779513 |
Protein GI | 170738253 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.656172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.17892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGG TCGACGCCTC GTTCGAGCCG CGTCGCGCCG ATTCGACGGC GCAGGGCGCA CGTGCACCGC GTGCGCACGC GTGGCGCGGC CTCGCGATCG TGGTCGCCGT GGCGGCCGTG CTGCTGGTCG CCGGTCCGTT CGTGTTCGGT TCGTATTTGC TGAACGTCCT GATCCAGGCG TTTTTCTTTT CGATCGTCGC GGTGACGGTC GACCTGTTGT GGGGCTATAC CGGCTACCTG ACCTTCGGCC AGTCGGCGTT CTTCGGCATC GGCGCGTACG CGGCCGGGCT CGTGTTCACG CACGGCGGTT TTTCGGCGCC GCACGCGCTG TTCGCGATCG GCGCGGCGCT CGCGGCGACG GCGGCCGTCG CCGCGGTGTT CGGCTGGCTG TCGTTCTATC GCGGCGCGTC GCCGTTCTTC GCGACCGTGA TGTCGCTGGT GCTGCCGATC GTGCTGACAC AGTCGCTGCT GTCGGGCGGA GAATGGACCG GCTCGAGCTC GGGGCTGACC GGCTTCGAGA CCTTCGATCT GTCGCTGGGC CAGTGGTACG GGATCGCCGG TGCCGCGCTG CTGGTCGTCG CGGTGCTGGC CTGGGTGTTC GTGCGCAGCG ACGGCGGCCG CCTGCTGGTC GCGATCCGCG ACAACGAGGC GCGCTGTGCG TATCTCGGCA TCAATACGTC GATCGTCAAG ATCGTGCTGC TGGTCGCGAC CGCGATGATC GCCGGGCTGG CCGGGTTCGG CTACGGCGCG TTCAGCGGCG TGGTCGCGCC GGAGCTGTCC GGTTTCCTGC TCGGCACGCA ACTCGTCGTC TGGGTCGCGC TCGGCGGGCG CGGCACGTTG TGGGGGCCCG TGCTCGGTTC GGTGCTGATC AACGTCGCGA CGGCCTACCT GAGCGGGAGC ATGCCGTTCG CATGGCAACT GATTCTCGGC GCCGCGTTCG TCGTCGTGAT CGTGTTGCTG CCGAAGGGCC TCGTGCCGCT GCTCGCGAGG CCGGTGCGCC GCTTCATCGC GAGCGGGCGG CCGTTGCCGG TGCTCGTGGA GCGGCCGGTA CGCGCGCTCG AAGCCGCGGC CGGCGCCGTG CCTGCACTGG ACATGCGCGC GGTCGAGCGG CATTTCGGCA GTCTCAAGGT ACTGCAGGGC ATCGACCTGC AGGCCGGCGG CGGCGAGCTG GTCGGCCTGA TCGGCCCGAA CGGCGCGGGC AAGACGACGC TGATGCGCTG CATGAGCGAC GGCGCCGAGC GCTCGTCGGG CACCGTCGCG CTCGGCGGCA CGGAGATCGG CCGGATGCCG CCGGAGCGCT GCGCGCGGCT CGGTCTGGGC CGAAAGTTCC AGAACGCCAA CGTGTTCGAC AGCCTCACCG TGGCCGAATG CCTGCGCATC GCCGGCACCC TCGTCGAGCG ACCGTCGCTG GTGCGTTCCG CGACGACGCT CGCGCTGCCG CCGTACGCGC TGGAGGTGAT CCGGGCGACA CGCCTCGACC GCAAGCTCGA CGCCGTCGCG AAGGATCTGT CGCACGGCGA GCAGCAGGCG CTCGAACTGG CGATGGTGCT CGCGCTGGAA CCGCGCATCG TGCTGCTCGA CGAGCCGACG GCGGGACTGA CCAAGGTCGA GCGTACGCAG ATCGGCAACG TGCTCGCGGC GCTCGCGCAC CGGTACGGGC TGTGCTGCCT GCTCGTCGAG CACGACCTGG ATTTCGTCGC GGAAGTCGCG ACCCGCATCG TCGTGCTGCA TCAAGGCAGG ATCGTGATGC AGGGCAGTTT CGCCGACGTG GTGGCGTCGG AACTGGTCCG GACCATTTAT TCCGGCAGCG CGCAGGGCGG CGCCGCGGCC GTGCGACAGG AGGCGCCATG A
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Protein sequence | MAKVDASFEP RRADSTAQGA RAPRAHAWRG LAIVVAVAAV LLVAGPFVFG SYLLNVLIQA FFFSIVAVTV DLLWGYTGYL TFGQSAFFGI GAYAAGLVFT HGGFSAPHAL FAIGAALAAT AAVAAVFGWL SFYRGASPFF ATVMSLVLPI VLTQSLLSGG EWTGSSSGLT GFETFDLSLG QWYGIAGAAL LVVAVLAWVF VRSDGGRLLV AIRDNEARCA YLGINTSIVK IVLLVATAMI AGLAGFGYGA FSGVVAPELS GFLLGTQLVV WVALGGRGTL WGPVLGSVLI NVATAYLSGS MPFAWQLILG AAFVVVIVLL PKGLVPLLAR PVRRFIASGR PLPVLVERPV RALEAAAGAV PALDMRAVER HFGSLKVLQG IDLQAGGGEL VGLIGPNGAG KTTLMRCMSD GAERSSGTVA LGGTEIGRMP PERCARLGLG RKFQNANVFD SLTVAECLRI AGTLVERPSL VRSATTLALP PYALEVIRAT RLDRKLDAVA KDLSHGEQQA LELAMVLALE PRIVLLDEPT AGLTKVERTQ IGNVLAALAH RYGLCCLLVE HDLDFVAEVA TRIVVLHQGR IVMQGSFADV VASELVRTIY SGSAQGGAAA VRQEAP
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