Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5901 |
Symbol | |
ID | 6128705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 3094951 |
End bp | 3095784 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641652985 |
Product | inner-membrane translocator |
Protein accession | YP_001779512 |
Protein GI | 170738252 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.134465 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGACTGG CATTGGACAT CTGTACGACG GCGGCCGTGC TGTTCATCGT GACCGTTGGC CTGATGGTGA TCTTCGGCGT GATGCAGATC GTGAACTTCG CGCATGGCGC GCTGCTCACG CTGGGCGCCT ACGCGAGCTT CGTCGTGACG CGACTGGGGC TTGATCCGTG GGTGAGCGTG CCGCTCGCGA TCGCGGTGGG TACGGTGGTC GGCATGGCGG TCGAATGGAT CATCGTCCGG CCGCTGTACA AACGGCCGCT CGACGCGATT CTGGCCACCT GGGGGCTCGG CATCGTGATC GGGCAGATCA TCGTGATGGT GTTCGGCCGT GAAGTGCAGT TCGTCGAAAC CTCGATGAAG GGCGCGGTGT CGATCGCGGG CACCGAATAC TCGGCCTACC GGCTGGTGCT GGTGCCGATC GCGCTCGGGC TCTGCGCGGG ATTGACGCTG CTGCTGTCGG GCACGCGCTT CGGCGTGAAG ACGCGGGCGG TCATCATGAA CGAAGATCTC GCACGCGGGC TCGGGATTCA TTCGGGTCGC ATCCGCTTCG TCACGTTCGC CCTCGGCGCG GCGCTCGGTT CGCTCGCCGG CGCGCTGATC ACGCCGCTGT CGAGCGTCGA TCCCGACATG GGCGTCGGGT GGATCGTCAG CGCGTTCATG CTGGTGATGG TGTCGGGGCA CTCGATGGCG AGCCTGCTCG TCACGTGCAT CGTGTTCGGC GCATGCCAGG TGCTCGTCAG CACGTTCGTC AGCCCGGTGC TGGGCGGCCT GACGATCGCG GTGCTCGCGG CGCTGACGCT GCGCATCCGC CCGCGGGGGT TCGCTCATGG CTAA
|
Protein sequence | MGLALDICTT AAVLFIVTVG LMVIFGVMQI VNFAHGALLT LGAYASFVVT RLGLDPWVSV PLAIAVGTVV GMAVEWIIVR PLYKRPLDAI LATWGLGIVI GQIIVMVFGR EVQFVETSMK GAVSIAGTEY SAYRLVLVPI ALGLCAGLTL LLSGTRFGVK TRAVIMNEDL ARGLGIHSGR IRFVTFALGA ALGSLAGALI TPLSSVDPDM GVGWIVSAFM LVMVSGHSMA SLLVTCIVFG ACQVLVSTFV SPVLGGLTIA VLAALTLRIR PRGFAHG
|
| |