Gene Bcenmc03_5901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5901 
Symbol 
ID6128705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp3094951 
End bp3095784 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content66% 
IMG OID641652985 
Productinner-membrane translocator 
Protein accessionYP_001779512 
Protein GI170738252 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.134465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTGG CATTGGACAT CTGTACGACG GCGGCCGTGC TGTTCATCGT GACCGTTGGC 
CTGATGGTGA TCTTCGGCGT GATGCAGATC GTGAACTTCG CGCATGGCGC GCTGCTCACG
CTGGGCGCCT ACGCGAGCTT CGTCGTGACG CGACTGGGGC TTGATCCGTG GGTGAGCGTG
CCGCTCGCGA TCGCGGTGGG TACGGTGGTC GGCATGGCGG TCGAATGGAT CATCGTCCGG
CCGCTGTACA AACGGCCGCT CGACGCGATT CTGGCCACCT GGGGGCTCGG CATCGTGATC
GGGCAGATCA TCGTGATGGT GTTCGGCCGT GAAGTGCAGT TCGTCGAAAC CTCGATGAAG
GGCGCGGTGT CGATCGCGGG CACCGAATAC TCGGCCTACC GGCTGGTGCT GGTGCCGATC
GCGCTCGGGC TCTGCGCGGG ATTGACGCTG CTGCTGTCGG GCACGCGCTT CGGCGTGAAG
ACGCGGGCGG TCATCATGAA CGAAGATCTC GCACGCGGGC TCGGGATTCA TTCGGGTCGC
ATCCGCTTCG TCACGTTCGC CCTCGGCGCG GCGCTCGGTT CGCTCGCCGG CGCGCTGATC
ACGCCGCTGT CGAGCGTCGA TCCCGACATG GGCGTCGGGT GGATCGTCAG CGCGTTCATG
CTGGTGATGG TGTCGGGGCA CTCGATGGCG AGCCTGCTCG TCACGTGCAT CGTGTTCGGC
GCATGCCAGG TGCTCGTCAG CACGTTCGTC AGCCCGGTGC TGGGCGGCCT GACGATCGCG
GTGCTCGCGG CGCTGACGCT GCGCATCCGC CCGCGGGGGT TCGCTCATGG CTAA
 
Protein sequence
MGLALDICTT AAVLFIVTVG LMVIFGVMQI VNFAHGALLT LGAYASFVVT RLGLDPWVSV 
PLAIAVGTVV GMAVEWIIVR PLYKRPLDAI LATWGLGIVI GQIIVMVFGR EVQFVETSMK
GAVSIAGTEY SAYRLVLVPI ALGLCAGLTL LLSGTRFGVK TRAVIMNEDL ARGLGIHSGR
IRFVTFALGA ALGSLAGALI TPLSSVDPDM GVGWIVSAFM LVMVSGHSMA SLLVTCIVFG
ACQVLVSTFV SPVLGGLTIA VLAALTLRIR PRGFAHG