| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5889 |
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| Symbol | |
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| ID | 6128693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 3079620 |
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| End bp | 3080816 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641652973 |
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| Product | porin |
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| Protein accession | YP_001779500 |
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| Protein GI | 170738240 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.28884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGC ATGCCGGCGC ACGCGTCGCG GGGACCGTCA TTGCCGCCTG CCTGAGCGGC
TTCGTGCCGG ATGTCGCGCA TGCCCAGAGC AGCGTGACGC TGTACGGCCT GATCGACACG
TCGATCACCT ACTCGACCAA CCAGCGCACG CGCGGTGCCG GCTCGCCCGG CGGCGGCAGC
GTCGCGATGA CGAGCGGCGC ACTGAACGCG TCGCGCTGGG GGCTGCGCGG CCGCGAGGAT
CTCGGCGGCG GAATGGCCGC GGTCTTCGCG CTCGAAAACG GCTTCTCGGG CACCACCGGC
AAGCTGTCGC AGAAAGGCGT CGACCTGTTC GGCCGCCAGG CGTGGGTCGG CGTGAGTTCG
CAGACGGCCG GCACGCTGTC CTTCGGACGC CAGTACGACC TGATCCTCGA TTACGTGACG
CCGCTCGGCG CGTCCGGCCC CGGCTGGGGC GGCAATCTCG CGGTCCACCC GTACGACAAC
GACGATTCGA ACCGCAACCT GCGCATCAAC AACGCCGTGA AGTACGCGAG CCCGACGGTT
CGCGGGTTGA GATTCGGCGC GATGGTCGGC TTCTCGAACG CTGCCGGCCA GTTCTCCAAC
AATGCGGTGT GGAGCACGGG GGTGTCGTAC GAGAATGGGC CGGTGAAGCT CGGCGCCGGC
TACCTGAAGA TCAGCCGCGA CCGCAACGCG CCGAACCCGG ACGGCGCGCT GAGCACGGTC
GACGGCTCGG CGACGATCAC GGGCGGCAAC CAGCAGATCT GGGCGATGGC CGGCCGTTAT
GCGTTCGGGC CGCACTCGGT CGGCGCGGCG TGGTCGCATT CCGCCACCGA CGGCGTGACG
GGCGTGCTCC AGGGCGGCAA CATCGCGCCG CTGAAGGGCG AATCGCTGGT GTTCGACAAC
TTCTCGATCG ACGGACGCTA CTTCGTCACG CGCGCGCTGA GCGTCGCCGC CGCGTACACG
TACACGATGG GCCGCTTCGA CACCCGCACG GGCCAGACGC GCCCGAAATG GAACCAGGTC
GTCGCGCAGG CCGGCTACGT GCTGTCGAAG CGCACGGACG CGTATCTCGA AGGCACTTAC
CAGAGCGTAA GCGGCGGCAA CGGCAATCCT GCGTTCAACG CGACCGTCTG GACCTTGACG
CCTTCCGCGA ACAGCAACCA GGTCGTCGTC GCACTGGGGC TGCGGCACAA GTTCTGA
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| Protein sequence | MNQHAGARVA GTVIAACLSG FVPDVAHAQS SVTLYGLIDT SITYSTNQRT RGAGSPGGGS
VAMTSGALNA SRWGLRGRED LGGGMAAVFA LENGFSGTTG KLSQKGVDLF GRQAWVGVSS
QTAGTLSFGR QYDLILDYVT PLGASGPGWG GNLAVHPYDN DDSNRNLRIN NAVKYASPTV
RGLRFGAMVG FSNAAGQFSN NAVWSTGVSY ENGPVKLGAG YLKISRDRNA PNPDGALSTV
DGSATITGGN QQIWAMAGRY AFGPHSVGAA WSHSATDGVT GVLQGGNIAP LKGESLVFDN
FSIDGRYFVT RALSVAAAYT YTMGRFDTRT GQTRPKWNQV VAQAGYVLSK RTDAYLEGTY
QSVSGGNGNP AFNATVWTLT PSANSNQVVV ALGLRHKF
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