Gene Bcenmc03_5887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5887 
Symbol 
ID6128691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp3077068 
End bp3078327 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content71% 
IMG OID641652971 
Productgluconate 2-dehydrogenase (acceptor) 
Protein accessionYP_001779498 
Protein GI170738238 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.526257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.403041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCA CACTCGCTCA TCGTGTCGCG CGGGCCGCGG GCCTGCCGGC GCTCGCGGCG 
GCCTGCGCAC TGCTGCTCGC CGCCTGCGGC GGCCACGACG CGCCGGCGTC GAGCGCGGCG
TCCGGCGCAC CCGGTGCCGA CGCGGTCGCG CGCGGCCGCT ATCTCGTCAA GGCCGCCGAC
TGCGCGGCGT GCCACACCGC GAAGGACGGC GCGCCGTTCG CCGGCGGCGC GGCGCTCGAA
TCGCCGTTCG GCACGTTCTA CGGCTCGAAC ATCACGCCCG ACAAGGATCG CGGGATCGGT
AACTGGAGCG CGGACGACTT CTACGCCGCG CTGCACGACG GCAAGGCGCC GGGCAAGCGT
CTGTATCCGT CGATGCCGTA CACGTCGTAC CGGCAGCTCA CGCGCGCCGA CGCCGACGCG
ATGTACGCGT ACCTGATGAC GGTCAGGCCG GTCGCGCAGG AAAACCGCGC GCACGACCTG
AAGTTCCCGT ACAACCTGCG CTTTGGCATG GTGTTCTGGG ACATGCTGTT CCTGAAGGAC
AGCCTGCCGG ACGCGTCGAC CGGACAATCC GCCGACTGGC AGCGCGGCCG CTATCTCGCC
GGCGCGCTCG GCCACTGCGC GGAATGCCAC ACGCCGCGCG CGTTCACGGG CCAACTCGAT
GGCGCGAAGC CGTTCGCGGG CGCCGCGCTC GGCCGCGTGG CCGCGCCCGA CATCACGCCG
GCGGGCCTGG CCGCGCGCGG CTGGACGGGC GCCGATCTGC AGACGTTCTT CGGCGTCGGC
ATCGCACCGC AAGGCTCCGC GTTCGGCGAG ATGTATCCGG TCGTGCACCT GAGCACGCAG
TACCTGACGA AGGACGACCT GCGCGGGCTG TCGACGTACC TGCTCGGCGA TACGCCGCCC
GCGCCGCAAC CGGTGAAGGC GGTATCGGCC GACGCCGCGC AACTGGCCGC CGGCCGCTCG
GTGTATCTCG CGGTGTGTGC GGGCTGTCAC GGCTTCAACG GCGAAGGCAA GCCGCACGTG
GCGGTGCCGA TGAACGGCAA CTCGACGGTG CGTCAGGCCG ACTCGCGCAA CCTGCTGGTC
GCGATGCTCG ACGGCATCGA CGAGCAGAAG TTCGCCGGTT TCGAAAACCT GCAGCCGATG
CCGGGTTTCG CGAAAACGTT GAGCGATGAC GAACTCGCGC AACTCGCGAA CTACCTGCGC
GCGACGTGGG GCGGCCAGCC TGCGAGCGTC ACGCCGTCCG ACGTGAAGGC GATGCGTTGA
 
Protein sequence
MKRTLAHRVA RAAGLPALAA ACALLLAACG GHDAPASSAA SGAPGADAVA RGRYLVKAAD 
CAACHTAKDG APFAGGAALE SPFGTFYGSN ITPDKDRGIG NWSADDFYAA LHDGKAPGKR
LYPSMPYTSY RQLTRADADA MYAYLMTVRP VAQENRAHDL KFPYNLRFGM VFWDMLFLKD
SLPDASTGQS ADWQRGRYLA GALGHCAECH TPRAFTGQLD GAKPFAGAAL GRVAAPDITP
AGLAARGWTG ADLQTFFGVG IAPQGSAFGE MYPVVHLSTQ YLTKDDLRGL STYLLGDTPP
APQPVKAVSA DAAQLAAGRS VYLAVCAGCH GFNGEGKPHV AVPMNGNSTV RQADSRNLLV
AMLDGIDEQK FAGFENLQPM PGFAKTLSDD ELAQLANYLR ATWGGQPASV TPSDVKAMR