| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5883 |
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| Symbol | |
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| ID | 6128687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 3070358 |
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| End bp | 3071908 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641652967 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001779494 |
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| Protein GI | 170738234 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0454667 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTCA GAGCGTCTCT CCTGAACTCC GTTCTCGCCA CGCCACCCTC CGGCAACCAC
CGCGTGACGG CCGCGCTGCG TCCGTCGATG CTCGTTACGC TGTTCGAGGA CGTGCGCCCG
ATGGCGCTGT CCGGGCTCGC GAGCGGCTTC GTCGCGGCCG TCGCGCTGAT CCGGCTGCAG
CAGCTGTGGT GCCTCGCGTG GCTCGTCGTC GACGTCGGCC TGCTCATTGC GCGCCTAGCG
ATCGCACGGG CCTACACGGT ACGGCGCAAC GCCGGCGACG ATCGCGCCGA ATACTGGGCG
AGGCGCTATG CGCCGGTGTC GCTCGTTGCC TGCTTCGTGC TCGGCCTCGG CGTGATGGGC
TGCGTGCAGG CCACCGACGT CGAACTCGGG ACGCTGTCCG TGATGGTCGC AGGCGGCGTG
TTCGGCGGGA TCGCGTCGCG CAATTCGGCG CTGCCGCGGC TCGCGATGAC GCAGGTCGTG
CTCGGCGTGC TGCCGATCGG CGTCGGTGCG CTGCTGGCCC CTCGGCCGGG TGCCTGGCTG
CTGGTGCCGC CGCTCGCGAT CTATCTCGCG GCGATGCGCA CGGTCGTCCA GCGCCATTAC
CGCGTGCTCG TCGCGCTGAT CGCCGCGCGC CAGCGCAACG CCGAACTCGT CGCCCGCTTC
GACGCCGCCC TCACCTACAT GCCGCACGGC CTGTGCATGA TCGACGGCGA CAGCCGCGTG
ATCGTCGCGA ACCGTCGCAC CGCGCAACTG TTCGGCTCGC CGCGCGAGAT CATGCTCGAT
ACGCCGTTGC CCGCCGTGGT CGCCGCGCTC GGCACCGATG CCGTGATCGA TCCCGGCAGC
GCCGGCCTCG CCGCGCAGTG CGACAGCTGG CTGAGCCTCA ACGAGCCCGG GCCGCTCGAC
ATCGCGCTCG CCGACGGCCG CCAGCTCGAA CTGACGCGCC ACCGCGTGCC TGACGGCAAC
GCGGTGATCA TCGTCGAGGA CGTCACCACA CGCCGTCAGA CCGAACAGCA CATCCGGCAC
CTCGCGCGAC ACGACTCACT GACGGGTCTG CCGAATCGCC ACGAACTGCA CGCCGAGCTC
AAGCGAATGC TCGCGCGCCG GCCGCGGCTG CCGAGCCCGG CATTCGCCAT CATGTATCTC
GACCTCGACG GCTTCAAGTC GATCAACGAC CGCTTCGGCC ACCAGGCCGG CGACGAAGTG
CTCACGCAAG TCGCCGAGCG GCTCGGCAAG ACGCTGCCGC CGGGCGAGCT CGCCGCGCGC
ATCGGCGGCG ACGAATTCAT CGTCGCGATC GACGACACGA CGATGCAAGC GTGCTCGATC
CTCGCCGCGC GGATCATCCG GCAGATTTCG GCGCCGTACG CGCTGTCGAT CGGCGAGACC
GTCTGCATCG GCATCAGCAT CGGCATCGCG CTCGACGACG GGCACGGCTC GCCCGACGAA
CTGATCCGGC AGGCCGACAG CGCGCTGTAC GACGCGAAGT CGGCCGGCAA GGGCATCTAC
TGCTTCTACT CGAGCGGCAG CCGCCGCGTG GTGCCGGCCG CCGCCAGTTG A
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| Protein sequence | MAVRASLLNS VLATPPSGNH RVTAALRPSM LVTLFEDVRP MALSGLASGF VAAVALIRLQ
QLWCLAWLVV DVGLLIARLA IARAYTVRRN AGDDRAEYWA RRYAPVSLVA CFVLGLGVMG
CVQATDVELG TLSVMVAGGV FGGIASRNSA LPRLAMTQVV LGVLPIGVGA LLAPRPGAWL
LVPPLAIYLA AMRTVVQRHY RVLVALIAAR QRNAELVARF DAALTYMPHG LCMIDGDSRV
IVANRRTAQL FGSPREIMLD TPLPAVVAAL GTDAVIDPGS AGLAAQCDSW LSLNEPGPLD
IALADGRQLE LTRHRVPDGN AVIIVEDVTT RRQTEQHIRH LARHDSLTGL PNRHELHAEL
KRMLARRPRL PSPAFAIMYL DLDGFKSIND RFGHQAGDEV LTQVAERLGK TLPPGELAAR
IGGDEFIVAI DDTTMQACSI LAARIIRQIS APYALSIGET VCIGISIGIA LDDGHGSPDE
LIRQADSALY DAKSAGKGIY CFYSSGSRRV VPAAAS
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