| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5874 |
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| Symbol | |
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| ID | 6128678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 3059209 |
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| End bp | 3061002 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641652958 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001779485 |
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| Protein GI | 170738225 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.2284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.116793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA CGACCCACCT CGGCGGCGCG CTGCCGCCGC TCTCTTCCAC CGGCGCACGC
GAGCCCGGCA CGCGTTTGCG GATCGTGCCC GCGCGCCACC GGTCGCGCAC GGCCGGCACC
GTGCTCGCGC TCGTGCTGAT CGCGCTCACG CTGTATTCGC TCCTCGGCAA CCCGCAGTGG
GGCTGGCCGG TGTTCGCCGA ATGGTTCCTG TCGCCGCCGG TGCTGTCGGG GCTCGCGCGC
ACGCTGGTGC TGACGCTGCT CGGCGCGGTG TTCGGCTTCG TGCTCGGCGC GTTCGTCGCG
CTGGCCCGAT TGTCGCGCTC GCGCCTGCTG TCCGCCAGCG CATGGACCTT CGTGTGGCTG
TTCCGCTCGA TTCCGCTGAT CGTGCTGCTG CTGATCCTGA ACAACCTCGG CTACCTGTAC
GAGCACGTGC GGCTCGGCGT GCCGTTCACC GATATCGTGT GGTTCGACAC GCCGACCACC
GACCTCATTA GTCCGTTCCT CGCGGCCGTG CTCGGCCTCA CGCTGAACCA CGCGGCGTTT
TCCGCGGAGG TGATCCGTGG CGGCATTCTC GCGGTCGACC AGGGGCAGCT CGAAGCCGCC
GCCGCGCTCG GGCTGCCGCG CGGCCGCCAG ACGTCGCGGA TCGTGCTGCC GCAGGCGATG
CGCGCGATCC TGCCGACCGC ATTCAACGAC CTGATCTCGC TCGCGAAAGG CACGTCGATG
GTGTACGTGC TCGCGATGCC CGAGCTGTTC TACACGGTGC AGGTGATCTA TCGCCGCAAC
CTCGAAGTGA TTCCGCTGCT GATGGTCGCG ACCGTCTGGT ACCTGATCAT CCTGACCGTG
CTGTCCGCGA TCCAGGTGCA GGTCGAGCGG CACTATGCAC GCGGCGCGCT GCGCAATCCG
CCGCCGTCGG TGGTCACGTT CGCGCTTGCG CGCCTCGGCG GGCTGTGGCG GCGTGTCGCG
TCACGCCGTG CGGCGTCGAA TGCGCAGGCC GCAGACGACA CGCGCACCGA TACCGCGGCC
GCCGTGTCGC GCACCGGCGG CGAAGTGGCC GTGCATGGCG TGTCGAAGCA GTTCGGCATG
CAGCGCGTGC TCGACAACGT GTCGTTCGTC GCGCCGCGCG GCAGCGTGAC CGTGATCGTC
GGGCCGTCCG GCTCCGGCAA GTCGACCCTG CTGCGCACGA TCAACCATCT CGAACGCGTC
GACGACGGTT TCATCGACAT CGACGGCGAA CTGATCGGCT ATCGCCGCGA CGGCGACGTG
CTGCACGAAC TGAGCGAACG CGACGTGCTG AAGCGGCGCA CGGCCGTCGG CATGGTGTTC
CAGAACTTCA ACCTGTTCCC GCACCTGACG GTGCTCGAGA ACCTGATCGA AGCGCCCATC
GCCGTCGCCG GCGTGACGCG CGATGCGGCC GAGCACACCG CGCGCACGCT GCTCGCGCGG
GTCGGCCTCG CGGACAAAGC CGATGCGTAC CCGCGCCAGT TGTCCGGCGG CCAGCAGCAA
CGCGTCGCGA TCGCGCGGGC GCTCGCGTTG CGTCCGAAGG TGCTGCTGTT CGACGAGCCG
ACGTCGGCGC TCGATCCGGA ACTCGTCAAC GAAGTGCTCG ACGTGATCAA GGAACTCGCA
CGCTCGGGTA CGACGCTCGT GATCGTCACG CATGAAATCG GCTTCGCACG CGAAGTGGCG
GACAACGTGC TGTTCATGGA GCGCGGGCGC ATCGTCGAGG CCGGGCCGCC CGCCGTCGTG
CTCGACGCGC CGTCGCATTC GCGCACCCGC GCGTTCCTGT CGCGGGTGCT GTGA
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| Protein sequence | MSDTTHLGGA LPPLSSTGAR EPGTRLRIVP ARHRSRTAGT VLALVLIALT LYSLLGNPQW
GWPVFAEWFL SPPVLSGLAR TLVLTLLGAV FGFVLGAFVA LARLSRSRLL SASAWTFVWL
FRSIPLIVLL LILNNLGYLY EHVRLGVPFT DIVWFDTPTT DLISPFLAAV LGLTLNHAAF
SAEVIRGGIL AVDQGQLEAA AALGLPRGRQ TSRIVLPQAM RAILPTAFND LISLAKGTSM
VYVLAMPELF YTVQVIYRRN LEVIPLLMVA TVWYLIILTV LSAIQVQVER HYARGALRNP
PPSVVTFALA RLGGLWRRVA SRRAASNAQA ADDTRTDTAA AVSRTGGEVA VHGVSKQFGM
QRVLDNVSFV APRGSVTVIV GPSGSGKSTL LRTINHLERV DDGFIDIDGE LIGYRRDGDV
LHELSERDVL KRRTAVGMVF QNFNLFPHLT VLENLIEAPI AVAGVTRDAA EHTARTLLAR
VGLADKADAY PRQLSGGQQQ RVAIARALAL RPKVLLFDEP TSALDPELVN EVLDVIKELA
RSGTTLVIVT HEIGFAREVA DNVLFMERGR IVEAGPPAVV LDAPSHSRTR AFLSRVL
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