| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5864 |
|---|
| Symbol | |
|---|
| ID | 6128668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 3045030 |
|---|
| End bp | 3046436 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641652948 |
|---|
| Product | alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
|---|
| Protein accession | YP_001779475 |
|---|
| Protein GI | 170738215 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0380] Trehalose-6-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.248301 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.866281 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCGAC TCGTCGTCGT ATCCAATCGC ATCGCAGATC CCCGTAAAGC CGCGGCCGGC
GGGCTCGCCG TCGCCGTGAA GGACAGCCTG CAGGAAACCG GCGGCGTCTG GTTCGGCTGG
AGCGGCAGGC TACGCGGCGG CGACGATCAG GCCACGCATG GCGACGACGT GCAGATCCAG
AACGTCGGCG GCATCCAGCT CGCGACGGTC GACCTCGATC CGCAGGATTA CGACGCTTAC
TATCTCGGCT ACTCGAACAA CGTGCTGTGG CCGGTGTTTC ACTACCGGCT CGATCTCGCG
CAGTTCGACC GGCGCTTCGC CGACGGCTAC CGACGCGTGA ACCAGCTGTT CGCGCGCAAG
CTGCGCACGC TGCTGCGCCC CGACGACGTC ATCTGGGTGC ACGACTACCA GTTGATTCCG
CTCGCGGCCG AGTTGCGCGC GATGGGCTGC ACGAATCCGA TCGGCTTCTT CCTGCACATC
CCGATGCCGC CGCCGCCGAT CATGGCCGCG ATCCCGGAAC ACGAATGGCT GATGCGCTCG
CTGTTCGCGT ACGACCTCGT CGGCTTCCAG ACCGAATCGG ATCTGCTCCA CTTCGAGCAT
TACGTCGAGG CCGAAGCCGG CGCGTCGCGG CTGCCCGACG GCCGACTGCG CGCGTTCGGC
CGCACGCTGT CGGCCGGTGC GTTCCCGATC GGCATCAACG TCGACGAATT CGAAGCGCTC
GCGCGCGATC GCGACGGCCT CGACATGTTC GAACGCATGC GCGACGAATA TTCGCGCCGT
CAGCTGCTGG TCGGGGTCGA CCGGCTCGAT TACACGAAAG GGCTGCCGCA GCGCGTGCAT
GCGTTCCGCG AGTTGCTCGA GCACTATCCG GAGAACCGCG ACCGCGCGAC GCTGATCCAG
ATCGCCGCGC CGAGCCGCGA GGATCTCGGC GCCTACGACG ACCTGCGACG CGAAATGGAC
AGTCTGTGCG GCGCGATCAA CGGCGACTAC GGCGAGCTCG AATGGATGCC GATGCGCTAC
ATTCACCGCA CCGTCGCGCG CAAGCGCCTG CCGGGCCTCT ACCGTGCAAG CCGGGTCGCC
CTCGTCACGC CGCTGCGCGA CGGGATGAAC CTCGTCGCGA AAGAGTTCCT CGCGGCGCAG
GACGCGGCCG ATCCGGGCGT GCTCGTGCTG TCGCGTTTCG CGGGCGCGGC CGAGCAACTG
AAGTCGGCGC TGCTCGTCAA TCCGTACGAC ACGCAAGGCA CCGCGCAGGC GATCCAGCGC
GCGCTCACGA TGCCGCTCGA AGAGCGCCGC CAGCGTCACG CGGCGCTGAT GGCGATCATG
CGCAAGACCG ACGTGCACTG GTGGCGCACG CGCTTTCTCG AAGCGCTCAC CGAAGCGGCC
GAAGTCGCGG CCGCGACCGA ATCCTGA
|
|---|
| Protein sequence | MSRLVVVSNR IADPRKAAAG GLAVAVKDSL QETGGVWFGW SGRLRGGDDQ ATHGDDVQIQ
NVGGIQLATV DLDPQDYDAY YLGYSNNVLW PVFHYRLDLA QFDRRFADGY RRVNQLFARK
LRTLLRPDDV IWVHDYQLIP LAAELRAMGC TNPIGFFLHI PMPPPPIMAA IPEHEWLMRS
LFAYDLVGFQ TESDLLHFEH YVEAEAGASR LPDGRLRAFG RTLSAGAFPI GINVDEFEAL
ARDRDGLDMF ERMRDEYSRR QLLVGVDRLD YTKGLPQRVH AFRELLEHYP ENRDRATLIQ
IAAPSREDLG AYDDLRREMD SLCGAINGDY GELEWMPMRY IHRTVARKRL PGLYRASRVA
LVTPLRDGMN LVAKEFLAAQ DAADPGVLVL SRFAGAAEQL KSALLVNPYD TQGTAQAIQR
ALTMPLEERR QRHAALMAIM RKTDVHWWRT RFLEALTEAA EVAAATES
|
|---|
| |