| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5855 |
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| Symbol | |
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| ID | 6128659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 3030898 |
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| End bp | 3032826 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641652939 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001779466 |
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| Protein GI | 170738206 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.699256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTC GTCACCTGCT TGCCACGTCC GCCGCCACCG CGCTGCTTTC CTCGCTCGCT
CATGCGGCCA GCGACACGGC GCAGGCGCAG CCCGCCGCGC CTGCGTCAGG CGCGGATCTG
CCGACGATCA GCGTGACCGA CACACGGCAT CTGCCCGAAT CGTTCGACCG CCGCTATGCG
TCGACGCAGG TGCTCACGCG CGAGGATCTC GACCGGCTGT CGCCCGCCGA CCCGAGCATC
ACGCAGGCGC TCGCGACGCT GCCGGGCGTG ACCGTCGCGC AGAACGGCGG GCCCGGCTCA
TCCGCGTCGG TCAGCATCCG CGGCTCGTCG GCGAGCCAGG TCGCCGTGTT CATCGACGGC
ATCCGGATCG GCTCGCCGAC CACCGGCATC GCGCCGTGGG CCGATCTGCC GACCGAAGCA
TTCGAGCGCG TCGAAGTGAT CTCCGGGCCG GCCGCCGCGT CGTTCGGCAA CAACGCGATG
GGCGGCGTCG TGCAGTTATT CACGCGCCGC GCCGCCCATC AGCCGAACCA GACCACCGTG
TCGTTCGGCG GCGGCTCGAA CAAGACGTTC GACACGCAGT TCCGCACGTC GGGCACGGTG
CCGTCGACGG GGCCGCTGGC CGCACTCGGC GGGCTCACCT ACTCGCTCGG GCTGCACGAC
TACAACACGG CCGGCATCGA TGCGACGCGG CCGTTCTTCT ACGGCCACGA AGACGGCCGC
AATCCCTATC ATGCGCAGGA CCTCGACGCA CGGCTCGGCT ACGCGCGCGA CAACTGGTCG
ATCTCGACGT TCGCGCTGTA CCACCGCTCC GATCTGTCCT ACGACAACAG CGGCTACGCG
AATCGCGAGC TCGATCACCA GTTGACGACC GGCGTCGCGT TTCATCTCGA CATCACGCCC
GATACGCAGT TCGACCAGTC GTTCGGCTAT GCGAACGACC GCCAGTTCAT CTACGCGGAC
AACCCGGCGC TCGCGACGGA CCAGATCAAT TCGCAGCGGA TCAGCACGTC GACGTCGCTG
ACCCATCAGG AGCACGGGTT TCACCTGTTC GGCCTGCCGC TGTCGGGCGA ATCGAAGCTC
GCGTACGACT TCACGCGCGA GCAGGCGTTC CTGCCGGTCG ACATTCCCGG CGGCGTGCCG
ACGCGCAACG ATTCCGCGTT CTCGCTGCAC CAGTCGGCGA CGCTCGGCCG CGTGACGATG
TTCGTCGCGG GCCGTCACGA GATCATCGCC GGGCAAGCGG TGAACACCGG CAACGCCGCG
CTGTCGTGGG CGATCACGCC GGTCTACACG GCGCGCGTGT CGTACGGCAA CGCGTTCCGC
CTGCCGACCT TCAACGACCT GTACTACCCC GGCTACGGCA ATCCGAACCT CAGCCCGGAA
CGCAGCACGT CGGTCGAGGC CGCGCTCGAC GCGAACACGG CGTACGGCAC GTTCACCGCG
GCGATCTACG ATACGCGCGT CAGCAACCTG ATCGCGTACA ACCCGGCGAC GTTCTCGCCG
ATGAACATCG GCCGTTCGCA CATTCGCGGC ATCGACCTGT CGTACAAGGG GACGATCGGC
CGTTCGACGC CGGTGAGCGT CGCGGTCGGC ATCCTGAATC CGCAGGACGA AACCAACCAG
ACCTGGCTCA GCCGCCGGCC GCGCCAGACG GTCAGCCTGA ACGTCGACCA CACGTGGGAC
GAACTGAAGC TGCACGCGCT GAGCACGGGC GCGTCGCTGC TGTACGGCGG CTCGACGTTC
GACGACCCGG CCAACCGGCA GTATCTGGCG TCGTACCTGA CGGTGAGCCT GCGCGCGTCG
TACCGGATCA ATGCGCACCT GACCGTGTCG GCGTCGCTGT CGAACCTGTT CGACCGGCAG
TACATGACCG CGTACGGCTA CAACACGCTC GGGCGCACCG CGTTCGGCAA GGTCAGCTAT
ACGTTCTGA
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| Protein sequence | MNIRHLLATS AATALLSSLA HAASDTAQAQ PAAPASGADL PTISVTDTRH LPESFDRRYA
STQVLTREDL DRLSPADPSI TQALATLPGV TVAQNGGPGS SASVSIRGSS ASQVAVFIDG
IRIGSPTTGI APWADLPTEA FERVEVISGP AAASFGNNAM GGVVQLFTRR AAHQPNQTTV
SFGGGSNKTF DTQFRTSGTV PSTGPLAALG GLTYSLGLHD YNTAGIDATR PFFYGHEDGR
NPYHAQDLDA RLGYARDNWS ISTFALYHRS DLSYDNSGYA NRELDHQLTT GVAFHLDITP
DTQFDQSFGY ANDRQFIYAD NPALATDQIN SQRISTSTSL THQEHGFHLF GLPLSGESKL
AYDFTREQAF LPVDIPGGVP TRNDSAFSLH QSATLGRVTM FVAGRHEIIA GQAVNTGNAA
LSWAITPVYT ARVSYGNAFR LPTFNDLYYP GYGNPNLSPE RSTSVEAALD ANTAYGTFTA
AIYDTRVSNL IAYNPATFSP MNIGRSHIRG IDLSYKGTIG RSTPVSVAVG ILNPQDETNQ
TWLSRRPRQT VSLNVDHTWD ELKLHALSTG ASLLYGGSTF DDPANRQYLA SYLTVSLRAS
YRINAHLTVS ASLSNLFDRQ YMTAYGYNTL GRTAFGKVSY TF
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