Gene Bcenmc03_5833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5833 
Symbol 
ID6128637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp3012519 
End bp3013394 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content54% 
IMG OID641652917 
Productputative lipoprotein 
Protein accessionYP_001779444 
Protein GI170738184 
COG category[S] Function unknown 
COG ID[COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.077855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCGAT TTGCACTTCT TTTGTTGGCT GCAACCGTGG TAGCAGGTTG TAATTCGAAA 
CAGTCGGACA ACATTCAATC GTCCGCGGCG AGTCCCAGCG CGTCTAGCGA CAGCACCCCG
GCACAACAAC CGTCACCGCC AGTAGTCGTC GCGCCTGCGC CTCCACCCCC TTCACACCAT
TACGCGATGA GTCAGGACGG CACGTATGGT TACGAGCCCG CGCTCAGTGA AGACGACGTG
AGAGCGGGAA AAGCGACAAA GGCGCTTGTC ATGATGCGCT ATGTCGGCGT GAGGGACGGT
AGTTATATTC TGCTGCTGGT CGACGAGGAC AACCCAAATA TTTCGAACCG CATCACGTGC
CAAGCTCCGT GCAATTTCGC CAAATCGCAA ACCATGGCAG GCGACTCGAT TCTGAAAACT
GAAACACTGC GCGTTGTACC TAATTCGCTT ATCGGCGCGA TGATCGAAGA CGCGATGTCC
GGACAACTGA CTCCCTATGG TCAACGTACG TCCGCGTTGA CCCCATCGAC TTTGCCCGTG
GCTCAATCGC CCGCCAACCA GCCCGCAAGC GATGCGACGA CATCCCCGCT GCAACAAACG
AGCTTCGACT GCACCAAAGC GAAGTCCATT CCCGAATTTT TGATCTGTCA CGATGCAGAT
CTTGCCGCTG CGGACCGGGA TCTCGCAACG ACTTACCAAC AAGCCAAAGA TGCCGTCATC
GACAAAACTG CGTTTGTTGA GCGAACGCGC AAACAGTGGA ATTTCCGAGA AAAAAATTGT
CGCGACAAGG AATGTCTGAC ATCGTGGTAT GCATACCAGA AACGCATACT GGCAAAGATT
GCACAAACTG GTGATGTCAC TGCTCAAGAC AACTGA
 
Protein sequence
MNRFALLLLA ATVVAGCNSK QSDNIQSSAA SPSASSDSTP AQQPSPPVVV APAPPPPSHH 
YAMSQDGTYG YEPALSEDDV RAGKATKALV MMRYVGVRDG SYILLLVDED NPNISNRITC
QAPCNFAKSQ TMAGDSILKT ETLRVVPNSL IGAMIEDAMS GQLTPYGQRT SALTPSTLPV
AQSPANQPAS DATTSPLQQT SFDCTKAKSI PEFLICHDAD LAAADRDLAT TYQQAKDAVI
DKTAFVERTR KQWNFREKNC RDKECLTSWY AYQKRILAKI AQTGDVTAQD N