Gene Bcenmc03_5828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5828 
Symbol 
ID6128632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp3007322 
End bp3008479 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content72% 
IMG OID641652912 
Producthypothetical protein 
Protein accessionYP_001779439 
Protein GI170738179 
COG category[S] Function unknown 
COG ID[COG4102] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00482968 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGT CCCGCCGACA ATTCCTCAGC GTCGCCGCCG CCGGCGCAGG CGCGATCCTC 
GTCGCGCCGC GCATCGTATT CGCGAACGTC GAGACCGACC GGCGCTTCGT GTTCGTGATC
CAGCGCGGCG CGGCCGACGG CCTGAACATC GTCGTCCCGT ATGCGGAGCC CGCGTATGCA
TCGCTGCGCG GCCCGCTCGC GATCGACACG GCGGCGGCAA CGCGGCTCGA CGGCACGTTC
GCGCTGCATC CGTCGCTCGC ACAGACCGCG CAGCTGTACC GCGACGGTCA GGCGCTGTTC
GTCCATGCGA TCGCGTCGCC GTATCGCGAC CGCTCGCATT TCGACGGCCA GAACGTGCTC
GAAACGGGCG GCCGTGCGCC GTACCAGGTG AAGGACGGCT GGCTGAACCG GCTCGCCGCG
CTGCTGCCGG CGACGCGCGA CAACGCGATC GCATTCGCGC CGACCGTGCC GCTCGCGCTG
CGCGGCACGG TGCAGGCCGC GTCGTATGCG CCGTCCGGCT TGCCCGCCGC GCCGGACGAT
CTGCTCACGC GCGTGTCGGC GCTCTACGAA GCCGACACGC AGCTCGGCCC GTTGTGGCAA
TCCGCGATGG AAGCACGCGG TCTCGCCGGC GATGCGCATG CACGGCAGGA CCCGGCCGGC
GTCGGCAAGC TCGCCGCGAC GTTTCTCGCG CGTGACGACG GCCCGCGGAT CGCGATGATC
GAGACGGGCG GCTGGGATAC CCATAGCGCG CAGAACGCGC GGCTCGCGAA TCAGTTGAAG
GCGCTCGACA CGATGCTCGC CGCATTGCGC GACGGCCTCG GGCCCGCATG GCAGCAGACC
ACGGTGCTGG TCGCGACCGA GTTCGGCCGC ATGGCCGCGG TGAACGGCAC GGGCGGCACC
GATCACGGGC AGGCATCGGT CGCGATGCTG GCGGGCGGCG CGGTCGCGGG CGGGCGGGTG
ATCGCCGACT GGCCGGGGCT GCGGCCCGGC GATCTGTACG AAGGGCGCGA CTTGAAGCCG
ACCGCGTCGC TCGACGCGCT GATCGCGGGC GCGGCCGCCG ACAGCCTGCG GCTCGATCCG
CGCCGCACCG CGTCCGCGTT GTTCGCGGAA AGCGGCCCGG CGCGGCCGAT GAGCGGTCTG
ATTCATGGGG TCGCGTGA
 
Protein sequence
MALSRRQFLS VAAAGAGAIL VAPRIVFANV ETDRRFVFVI QRGAADGLNI VVPYAEPAYA 
SLRGPLAIDT AAATRLDGTF ALHPSLAQTA QLYRDGQALF VHAIASPYRD RSHFDGQNVL
ETGGRAPYQV KDGWLNRLAA LLPATRDNAI AFAPTVPLAL RGTVQAASYA PSGLPAAPDD
LLTRVSALYE ADTQLGPLWQ SAMEARGLAG DAHARQDPAG VGKLAATFLA RDDGPRIAMI
ETGGWDTHSA QNARLANQLK ALDTMLAALR DGLGPAWQQT TVLVATEFGR MAAVNGTGGT
DHGQASVAML AGGAVAGGRV IADWPGLRPG DLYEGRDLKP TASLDALIAG AAADSLRLDP
RRTASALFAE SGPARPMSGL IHGVA