Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5824 |
Symbol | |
ID | 6128628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 3003986 |
End bp | 3004780 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641652908 |
Product | RNA polymerase sigma factor |
Protein accession | YP_001779435 |
Protein GI | 170738175 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.417668 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCGCG AACCGGATGT CGATGAAACC GACACGGCCG ACACCGTGTG CGATGCCGGG CGCGACGCGC GCGGCGATGC CGAACCGTCG GAACCGCCGG CATGGCGCCG TCCGGTGATG GCCCGACGCA TGCAAGGAGA GCACGACGAT GAGCTTCAGC CGGGCGGTGG GGATACCTGC CGTGACAGGG CGGCGCCCGC GCGCCGCGCG ACGGAGCAGG CGGCGTTGAA CGATCGCGGC GACCGCGATC CGGACGCGGA ACTCGTCGCG CGCGTCGGCG CGCGCGATGC GTCGGCGGTG CGTGTGCTCG TCGCACGCAA GCTGCCGCGG CTGCTCGCAT TGGCGACGCG CATGCTCGGC GACCGGAACG AAGCCGAGGA CGTCGCGCAG GAGACGTTCT TGCGAATCTG GAACCAGGCG CCGCGCTGGC GCGAAGGCGA AGCCCGCTTC GACACGTGGT TGCATCGCGT CGTGCTGAAC CTGTGCTACG ACCGGTTGCG CGGCCGGCGC GAGGATCCCG TCGACACGCT GCCCGACGTG CCGGATACGC AGCCGGAGCC GGCCGCGCAT GCGGAACTGC GTTCGCGCGA CGCACGCGTG CGGCAGGCGC TGGCCGCGTT GCCGCCGAGG CAGCGGGAAG CGCTGGTGCT CCAGTACTAT CAGGAAATGT CGAACGTGGA AGCGGCCAAC CTGATGGGCA TCACCGTCGA TGCGCTGGAA AGCCTGCTCG CCCGTGCGCG GCGCAACCTG CGCGCGCAAC TGGCCGGCGA CCCACCTAGC GAGGACAAGC GATGA
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Protein sequence | MRREPDVDET DTADTVCDAG RDARGDAEPS EPPAWRRPVM ARRMQGEHDD ELQPGGGDTC RDRAAPARRA TEQAALNDRG DRDPDAELVA RVGARDASAV RVLVARKLPR LLALATRMLG DRNEAEDVAQ ETFLRIWNQA PRWREGEARF DTWLHRVVLN LCYDRLRGRR EDPVDTLPDV PDTQPEPAAH AELRSRDARV RQALAALPPR QREALVLQYY QEMSNVEAAN LMGITVDALE SLLARARRNL RAQLAGDPPS EDKR
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