Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5814 |
Symbol | |
ID | 6128618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 2994811 |
End bp | 2996583 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641652898 |
Product | diguanylate cyclase |
Protein accession | YP_001779425 |
Protein GI | 170738165 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.479896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCC TCGGCCTCAC GTCGAAGCTG TCGGTGCTGT TCGCGTGCAT CGGCGTGATC GCGGCCGGCA CGACCGGCTA CTACGCGTAT CGCGCCAACC GCGCGATGCT CGTGCAGGAA GCGCAGCACA GCCTGCTGAT GTCGACGCAA TTGCTCGGGC AGCGCTTCAC CACCGCGCTT GCCGACGTGG CCGACGATGC GCTCGTGCTC GCGCAGTTGC CGTCGTCCGC GTCCGTCGCC GGCGGCGACA ACCCGGACAC CGCGCGACGC ATGCGGCTCG AGCAGGTGTA CTACAGCTTC ATGCGCAATC ATGCGGAATA CCTGCAGATT CGCCTGATCG CGAGCGGGCA TTTCGGGATC GAACGCATTC GCCTCGATCG CGATGCGCGC GGCATCGTCG TGCTGCCCGA AAGCGCGTTC CAGGAGAAAG GGCAGTTCTC CTATGTATTC GATACGCTCG CGACGGCGCC CGGTCATATC TATCTGTCGC CGATCGTGGT CAATCACGAG ACGGGATCGC ATGCGGCGGA AGGGCTGCCG ATCCTGCGCG TGGGCACGCC GGTGGTCGAC GCGGCCGGCC AGACGGTCGG CGCGCTCGTC GTCGACGTCG AGCTGTCGCG CGTGTTAGAC CGGCTCGAAC GCGATCTTCC GGACGACTAT GCGGTCTATC TCGCGAACGA GTGGGGCGAT TTTCTCGTGC ATCCCGATCC GGCGCAGACG TTCGGCTTCG ATCGCGGCCG GCGCGTGCTG ATGCAGGACC GCTTTGCCGT CACGCGCGCG CTGTTCGACA GCGCGCGCAC GAACGTGACG CTCAATGGAC TCGCGCAGCC CGACGAAGCA CCGGGCCAGA TGTTCGCGTT CGTGCGCACG CCGTTCGGGC AGGACGAGGG CAACCGCTTC GTCGTGCTCG GGATGGCGCG CCCGCTGGCC GACGTGCTCG CGCCGGCCGG CATGCTGGGC GAACGAATCG TCAGGATGGT GCTCGTATCG AGCGTGCTGG CGGTGATTCT CGCGATCCTG TTCGCGCGTG CGATCACGCG GCCGTTGCAG ACCCTCGCGC GCGCCGCGAC ACACGTGTTC GACGACCCGG CCGCCGAACG GCTGCCGGTC GCGCGGGCCG ACGAGATCGG CGTGCTCGCG CGCTGTTTCG ACAGCATGCG CGTGGAGATC CGCACGCAGA TGGCGATGCT GCGCGCGAAG CAGCTGGAAC TGACGCACCT CGCCGGTCAC GACCCGCTGA CCGGCCTGCC GAACCGCCTG CTGTTCATGG AGCATCTCGA GGCCGCGATC CGGCATGCGG CCGCGGTGCG CGAGGGGTTG GCGGTGATGT TCGTCGATCT CGACCGCTTC AAGCAGATCA ATGACCAGCA CGGACACTCG GCGGGCGACC GCACGCTCGT CGCGGTCGCG AAGCGGCTGA GCCAGGTGCT GCGCGCCGGC GACATGGCGG CACGGCTCGG CGGCGACGAA TTCATCGTGC TGATTTCGGA CGTGAGTTCA CCCGCGGTGA TCGGCGATGT CGCGTCGCGC ATCCAGATCG TGATGGCCGA GGAACTCGAG TTCGACGAAG GGCGCATGGC CGTCGGCGCG AGCATCGGCG TCAGCGAGTT TCCGGCGGAT GGCGCGTCGG CCGAGGAGTT GCTCGTCAAG GCGGATGCGG CGATGTATGC GGCGAAGGCG TCCGCGCAGT GCGTGTGCGT GCGCTATCAG GATCTGGTCC GCGGCGGTAC GCCGGACCAA ACCGGTCGCG TCGCCTCGGA CGGCACGCGC TGA
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Protein sequence | MIRLGLTSKL SVLFACIGVI AAGTTGYYAY RANRAMLVQE AQHSLLMSTQ LLGQRFTTAL ADVADDALVL AQLPSSASVA GGDNPDTARR MRLEQVYYSF MRNHAEYLQI RLIASGHFGI ERIRLDRDAR GIVVLPESAF QEKGQFSYVF DTLATAPGHI YLSPIVVNHE TGSHAAEGLP ILRVGTPVVD AAGQTVGALV VDVELSRVLD RLERDLPDDY AVYLANEWGD FLVHPDPAQT FGFDRGRRVL MQDRFAVTRA LFDSARTNVT LNGLAQPDEA PGQMFAFVRT PFGQDEGNRF VVLGMARPLA DVLAPAGMLG ERIVRMVLVS SVLAVILAIL FARAITRPLQ TLARAATHVF DDPAAERLPV ARADEIGVLA RCFDSMRVEI RTQMAMLRAK QLELTHLAGH DPLTGLPNRL LFMEHLEAAI RHAAAVREGL AVMFVDLDRF KQINDQHGHS AGDRTLVAVA KRLSQVLRAG DMAARLGGDE FIVLISDVSS PAVIGDVASR IQIVMAEELE FDEGRMAVGA SIGVSEFPAD GASAEELLVK ADAAMYAAKA SAQCVCVRYQ DLVRGGTPDQ TGRVASDGTR
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