| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5810 |
|---|
| Symbol | |
|---|
| ID | 6128614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 2990050 |
|---|
| End bp | 2991360 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641652894 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001779421 |
|---|
| Protein GI | 170738161 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.491735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACGCA TTCGATGGGC CATGATCCTG ATGTGCTTCC TGGCCAACGT CATCAACTTC
ATCGATCGCG CGAACCTCGC GATCGCGGCG CCCAGCATCC GTGCCGACCT CGGGCTCGAC
GCGGTCGGCA TGGGGCTCGT GCTGAGCGCG TTCTTCTGGA CCTATGCGTT CCTGCAATTA
CCGGCCGGCT GGTTCATCGA CAAGGTCGGC GTACGCGTGA GCCTCGCGCT GGCCGTCGGC
TGGTGGTCGG TGTTCACCGT CGCGACGGGC GCCGCGCGCG GCCTCGCGCA ACTCGTCGGC
GTGCGGCTGA TGCTCGGCGT CGGCGAAGCG GCCGCGATCC CGTCGTTCGC GAAGGTCGCG
TTCAACTGGT TCCCGCGCAG CGAGCGCGGC CTGGCCAGCA GCATCTTCGA CAGCGGCTCG
CGCGTCGGCT CCGCGCTGTC GCTGCCGCTC GTCGCGTGGC TGATCTCGCT CGTCGGCTGG
CGCGGGTCGT TCGTGATCAC GGGCGGCATC GGCATCGTCT GGGCGCTCGC GTGGTGGTTC
GTCTATCGCG ACCCGGAACG CTATCGCGCG ATCGCGCCGG ACGCCGTCGA TGCGCTGCTC
GCGCAACGCG GCGCACCGAC GGTTGCGGCC GCAACCGACG GCCCGAAGGT GTCGTGGCTG
GACCTGTTCC GCTATCGCAC CGTGTGGGGG ATGATGATCG GCCTGTTCTG CCTGAACTTC
GCGATCTACT TCTTCATCAC GTGGTTCCCG AGCTATCTGC TGCAGTCGCG CGGCTTCTCG
CTCGCGTCGC TCGGCACGTG GGGCATGCTG CCCGCGCTGC TCGCGATTCC CGGCGGCTGG
CTCGGCGGCT ACGTGTCGGA CAGCCTGTTC CGCCGGGGCT GGAGCGCCAC CGCCGCGCGC
AAGACCTGTC TCGTGCTCGG CATGCTGCTG TCGTCGTCGA TCGCGCTGTC CGCGTTCGTG
GAAAACGTGT GGGCCTGCCT CGGCCTGTTC GCGCTCGCGT ATGCCAGCCT GTCGTTCGCC
GGCGCCAACG TGTGGACGCT GGTCGGCGAA GTCGCGCCGA CGCCCGCGCA CGTCGCCTCG
CTCGGCGGCA TCCAGAACTT CGCGGGCAAT CTCGCGGGCA TCTTCATCAC GACCTTCACC
GGCGTGATGC TGTCGCTCAC GAAAGGCTCG TTCGTGGTGC CGCTCGCGGT GGCCGGCGCG
CTGTGCGTGG TCGGTGCGCT GTCGTACCTG TTCGTCGTCG GCAAGGTTGA ACCGTTACCG
CCGCTGCGGC GCGGCAGCAG CGCACGGAAT GTCGAGCCGA ACGCGGCGTG A
|
|---|
| Protein sequence | MPRIRWAMIL MCFLANVINF IDRANLAIAA PSIRADLGLD AVGMGLVLSA FFWTYAFLQL
PAGWFIDKVG VRVSLALAVG WWSVFTVATG AARGLAQLVG VRLMLGVGEA AAIPSFAKVA
FNWFPRSERG LASSIFDSGS RVGSALSLPL VAWLISLVGW RGSFVITGGI GIVWALAWWF
VYRDPERYRA IAPDAVDALL AQRGAPTVAA ATDGPKVSWL DLFRYRTVWG MMIGLFCLNF
AIYFFITWFP SYLLQSRGFS LASLGTWGML PALLAIPGGW LGGYVSDSLF RRGWSATAAR
KTCLVLGMLL SSSIALSAFV ENVWACLGLF ALAYASLSFA GANVWTLVGE VAPTPAHVAS
LGGIQNFAGN LAGIFITTFT GVMLSLTKGS FVVPLAVAGA LCVVGALSYL FVVGKVEPLP
PLRRGSSARN VEPNAA
|
|---|
| |