Gene Bcenmc03_5804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5804 
Symbol 
ID6128608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2981545 
End bp2984214 
Gene Length2670 bp 
Protein Length889 aa 
Translation table11 
GC content69% 
IMG OID641652888 
Producthypothetical protein 
Protein accessionYP_001779415 
Protein GI170738155 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein
[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACA ACCAGATACG TCGCCGCCCG GCCAGCCCGC GCCGCGACAC GCTATGCACC 
ACCACTGAAC ACGTTATGTC TTCCCGCCAC CCTGGTTCGC CCGGCCGTGC CGAGGCGGTG
ATCGCCCGTG CCCGGGCGCT GATCCGCAAC GAGCGCGTGC TGTCGCCGCT GCTCGCGCTC
GGCATCGGCC TGCTGCTGAT CGTGGTTTTC CAGCATCTGT CGGAATCCGT CGACTACCGG
TCGGTGATTC GCCAGTTGCG TCACATGTCC GTCGGCGAGT GGGGCGCGTC GCTGGCCGCG
ACGGCCCTCA GCTATCTCGC GCTCGTCGCC CGCGATGCGG TCGGCCTGCG TTATGTCGCG
GCCAGGGTGC CACGCGTCGC GCTGTGGATC GGTGCGATCG CCGGTTCCGC GCTCGGCAAC
GCGACCGGCT TCGGCGCGCT GACGGGCGGC GCGGTGCGCG CCCGCGTGTA CGGCGTGTCG
GGCGTCACGC CCGCCCAGAT CGGCCGGATG ACCGTATTCA CGAGCGGCAC GCTGGCGCTC
GCGATGGTGC TGATGACGGC GGTCGGCATG GTCTGCGTGC CGGAGGCGCT CGCCGCGATG
CTGCACGTCG TGCCCGGCGT GCTCACGTGG ACGGGCGCCG CGTTGCTCGT CGCGCTCGCC
GCGCTGGTCG TGCTGTGCGG CAACACCGCG CGCCCGGTCG TCACGCGCTT CAAATGGCTG
TCGTTCGACG TGCCGGCGCG GCGCGATCTC GTCGCGCAGG TCGTCTATGC GGTTCTCGAC
GTCGTTGCCG CGGGCCTGAC GCTGTGGGTG TTGCTGCCGG CGGCTCCCGT CGGCTTCCCG
ACCTTCATCA CCGTTTATGC AGCCGCGTTG CTGCTCGGGA TGATCGGCCA TACGCCGGGC
GGGATCGGCG TGTTCGAAGC GGCGATGGTC TTCACGCTGG GCCGCGAAGT GCCCGCGCAT
GCGATGGTCG CCGCGCTGAT CGCGTATCGC GCGATCTATT TCGGCGTGCC GCTCGTGCTG
TCGGCCGGCT TGCTGGCCGG CTTCGAGGGC CGCGCGCTGC GGCGCCGGCT CGTGACGCGG
CAGGCCGTGC GCGTGTCGCA ACTGGCGCCG GTGTTCCTGA GCCTCGTGAC CTTCGCGGTC
GGCGGGATGC TGGTGATCTC GAGCGCGACG CCCGCGTTCT GGCACCGGAT CGCGATCCTG
CGCCACATCG TGCCGCTGTG GGTGCTCGAA GGCTCGCAGG TGATCTGCAG CGTGCTCGGC
GTCGCGCTGC TGTTCGTCGC GCGCGGGCTG CTGCGCCGGC TCGATGGCGC GTGGTGGATG
ACGTTCGCCT TGACGCTCGC GAGCCTCGCG CTGTCGCTGG CCAAGGGCCT CGCGTTCGTC
GAGGCGGGCG TGCTCGGCAC GCTGCTCGTG CTGCTGCTCG TCAGCCGCCG CCGGTTCAAC
CGACATTCGT CGCTGCTTGC CGAGCGCTTC ACGGTGAGCT GGTTCGTGTC GGTGGCGATG
GTGCTGATGC TGGCCGTGTG GGTGCTGTTC TTCGCGTTCC GCGACGTGCC TTACACGCGC
GATCTGTGGT CGCATTTCTC GTTCGATGCG CGCGCGCCGC GGGCGCTGCG CGCGACGCTC
GCCGCCGGCG TATTCGTCGC GCTGTTCGCG CTGTGGCAAT TGCTGCGTCC GGCGCCGGGT
CGTTTCGTGA AGCCCGCGCA GCAGGACCTC ATCGACGCGG AGCAGATCAT CCGCGCGCAG
GAATGCAGCG ACGCGGGCCT CGCGCTGATG GGCGACAAGT CGTTCCTGTT TTCCGAATCG
CGCCGTGCGT TCCTGATGTA CGCGAAGAAC GGCCGCACGT GGGCCGCGCT GCACGACCCG
GTCGGGCCGC GTGAAGAGTG GCCGGCGCTG ATCAGCAAGT TCATTGCGCT CGCGCACGCG
CACAGCGGCC GCGCGGCGTT CTACCAGGTG CGCGCGAACG CGTTGCCGCT GTATCTCGAT
GCGGGGCTCA CGCTGATGAA GCTCGGCGAG GAAGCGCATA TCGCGCTCGA CCAGTTCGAC
CTGAAGGGTT CTAACCGTTC GCACCTGCGC TACGCGCTGC GTCGCGGCGA CAAGGATGCG
CTGACGGTCG AGGTGATCGC GCCGGGCGAC GTGCCGGCCG CGCTGCCGGC GCTGCGCGAC
ATCTCCGACG GCTGGCTCGA CAGCCGCGAT GCGCGCGAGA AGAGTTTCTC GGTGGCCGCG
TTCCACGACG GCTATCTGTC GACGCAGTCG GTGATGCTGG TGCGGCAGGC CGACAAGCCG
ATCGCGTTCG TCACGTTCAT GACGACCGAC CTCAACACCG AGGCGACGGT CGGCGTGATG
CGCCATCTGC CGGACGCATC GCCGTACGCG ATGGAGTATC TGTTTACGCA GCTCGCGCTG
CATCTGAAGG AAGCGGGGTT CCGCAAGCTG AGCCTGGGCA TCGCGCCGTT CTCGGGGATG
GGGGCGGCGA AGATGCCGTC GCCGTTCCAC CGGCTCGGCC TGATGGTCTG GCGCTTCGGC
GGCCGCTTCT ACAACTTCCG CGGCTTGCGC GCTTTCAAGA GCAAGTTCGA ACCGCACTGG
GAGCCGCGTT ATCTCGCGGC CTCGGGCTCG GTCGGCGTGT TCGTCACGCT CGCGGATCTG
TCATTGCTGG CTGGAGGTCG GCGTTCATGA
 
Protein sequence
MQNNQIRRRP ASPRRDTLCT TTEHVMSSRH PGSPGRAEAV IARARALIRN ERVLSPLLAL 
GIGLLLIVVF QHLSESVDYR SVIRQLRHMS VGEWGASLAA TALSYLALVA RDAVGLRYVA
ARVPRVALWI GAIAGSALGN ATGFGALTGG AVRARVYGVS GVTPAQIGRM TVFTSGTLAL
AMVLMTAVGM VCVPEALAAM LHVVPGVLTW TGAALLVALA ALVVLCGNTA RPVVTRFKWL
SFDVPARRDL VAQVVYAVLD VVAAGLTLWV LLPAAPVGFP TFITVYAAAL LLGMIGHTPG
GIGVFEAAMV FTLGREVPAH AMVAALIAYR AIYFGVPLVL SAGLLAGFEG RALRRRLVTR
QAVRVSQLAP VFLSLVTFAV GGMLVISSAT PAFWHRIAIL RHIVPLWVLE GSQVICSVLG
VALLFVARGL LRRLDGAWWM TFALTLASLA LSLAKGLAFV EAGVLGTLLV LLLVSRRRFN
RHSSLLAERF TVSWFVSVAM VLMLAVWVLF FAFRDVPYTR DLWSHFSFDA RAPRALRATL
AAGVFVALFA LWQLLRPAPG RFVKPAQQDL IDAEQIIRAQ ECSDAGLALM GDKSFLFSES
RRAFLMYAKN GRTWAALHDP VGPREEWPAL ISKFIALAHA HSGRAAFYQV RANALPLYLD
AGLTLMKLGE EAHIALDQFD LKGSNRSHLR YALRRGDKDA LTVEVIAPGD VPAALPALRD
ISDGWLDSRD AREKSFSVAA FHDGYLSTQS VMLVRQADKP IAFVTFMTTD LNTEATVGVM
RHLPDASPYA MEYLFTQLAL HLKEAGFRKL SLGIAPFSGM GAAKMPSPFH RLGLMVWRFG
GRFYNFRGLR AFKSKFEPHW EPRYLAASGS VGVFVTLADL SLLAGGRRS