Gene Bcenmc03_5798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5798 
Symbol 
ID6128602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2973823 
End bp2974167 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content68% 
IMG OID641652882 
Productnitrite reductase (NAD(P)H), small subunit 
Protein accessionYP_001779409 
Protein GI170738149 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID[TIGR02378] nitrite reductase [NAD(P)H], small subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.604474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.578121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC GTCTTCCGCT GTCCTGGACC CGCGTGTGCC CGCTCGACGA CATCGTGCCG 
AACACCGGCG TGTGCGCGCT CGTCAACGGC GAGCAGGTCG CCGTGTTTCA CGTCGCGCAT
GCCGACGGCG GCGTGTTCGC GATCGACAAC GTCGATCCCG TGTCGCAGGC CGCGGTGATG
TCGCGCGGGC TGATCGGCAG CCTCGGCGAG CGCGTCGTGG TCGCGTCGCC GCTGTACAAG
CAGCACTTCG ACCTGCGGAC CGGCGAATGC CTGGAAGCGC CCGAGCAATC GGTGAACGCG
TATCCGTCGC GGGTCGAGGA CGGCTTCGTG TGGATCGCGG CCTGA
 
Protein sequence
MNDRLPLSWT RVCPLDDIVP NTGVCALVNG EQVAVFHVAH ADGGVFAIDN VDPVSQAAVM 
SRGLIGSLGE RVVVASPLYK QHFDLRTGEC LEAPEQSVNA YPSRVEDGFV WIAA