| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5797 |
|---|
| Symbol | |
|---|
| ID | 6128601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 2971202 |
|---|
| End bp | 2973784 |
|---|
| Gene Length | 2583 bp |
|---|
| Protein Length | 860 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641652881 |
|---|
| Product | nitrite reductase (NAD(P)H), large subunit |
|---|
| Protein accession | YP_001779408 |
|---|
| Protein GI | 170738148 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1251] NAD(P)H-nitrite reductase |
|---|
| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.871719 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA TCGTCATCGG CCACGGCATG GTCGGCCACA AGCTCCTCGA ATGCGTCGCG
ACGCAAACCG GCGAGGCCGG CACGGCAGGC GCGCTGCAGG TCACCGTGCT CGGCGAGGAA
CCGCGCCCGG CCTACGATCG CGTGCACCTG TCGGAATTCT TCGCGGGCAA GTCGGCGGAC
GACCTGTCGC TCGTCGAACC GGGCTTCTTC GAGCGTCATC CGCAGTTCGA CCTGCGCCTG
AACGCGCAGG TCGCATCGAT CGACCGCGCC GCGCATACGG TCACGCTCGC ATCGGGCGAA
ACGCTCGCGT ACGACAAGCT GGTGCTCGCC ACCGGCTCGC GGCCGTTCGT GCCGCCGGTG
CCGGGCCGCG AGCGCGCGGG CTGCTTCGTG TACCGGACGA TCGAGGATCT CGAGGCGATG
CAGGCGTGCG GCGCGCACGC GAAGCGCGGC GTCGTGATCG GCGGCGGGTT GCTCGGCCTC
GAATGCGCGA AGGCGCTGCG CGACATGGGG CTCGATACGC ACGTGGTCGA ATTCGCGCCG
CGCCTGATGG CCGTGCAGGT CGACGACGGC GGCGGCCGGA TGCTGCGTTC GAAGATCGAG
GCGCTCGGCG TGACCGTGCA TACCGGCAAG AACACGCTCG AAATCGTCGA CGGCGACGAA
GGCGCGCACC GGATGGCGTT CGCCGACGGC ACGCATCTCG ACACGGACAT GATCGTGTTC
TCGGCAGGCA TCCGCGCGCG CGACGAACTG GCCCGCGCGT GCGGGCTCGA CATCGGTCCG
CGCGGCGGCG TCGCGATCGA CGACGCGTGC CGCACGAGCG ACGCCGACAT CTATGCGATC
GGCGAATGCG CGGCCTGGAA CGGCACGGTG TACGGCCTCG TCGCGCCCGG CTACGACATG
GCGCGCGTGG TCGCGAAGCA GCTCGCGGGC GACGCCGACG AAGCGGCGGC GGCCGCGTTC
GCCGGCGCCG ACATGAGCAC GAAGCTGAAG CTGATGGGCG TCGACGTCGC GAGCATCGGC
GACGCGCACG GCACGACGGC CGGCAGCCGC ACCTACCAGT ACGCGGACGA GCGCCGCCAG
GTCTACAAGA AGCTCGTGGT GTCCGACTGC GGCAAGTTCC TGCACGGCGC GGTGATGGTC
GGCGATGCCG CCGAGTACGG CACGCTGCTG CAGATGATGC TGAACCGCAT CGAGCTGCCC
GAGTCGCCGG AATTCCTGAT CCTGCCGTCG TCGGACGGCG CCGCGAAGCC GGCGATCGGT
GTCGACGCGC TGCCGGAAGG CGCGCAAATC TGCTCGTGCA ACAACGTGTC GAAGTCGCAG
ATCTGCGCGG CCGTGGCCGA CGGCGCGACG AGCCTCGGCG CGCTGAAGAC CTGCACGGGC
GCCGGCACGT CGTGCGGCGG CTGCGTGCCG CTCGTCACGC AGATCATGAA GGCCGAGATG
AAGAAGCAGG GCCTCGCGGT CAACAACCAT CTGTGCGAGC ACTTCCCGTA TTCGCGTCAG
GAGCTGTTCC ACCTGATCCG CGTCGAGCGC ATCACGACGT TCGACGCACT GCTGCACAAG
CACGGCCGCG GCCTCGGCTG CGACGTGTGC AAGCCGGCCG TCGCGGGCAT CCTCGCGTCG
TGCTTCAACG AGTTCGTGCT GAAGAAGGAG CACGCGGGGC TGCAGGATTC GAACGACTAC
TACCTCGCGA ACATCCAGCG CGACGGCACG TATTCGGTGG TGCCGCGCAT GCCGGGCGGC
GAAGTCACGC CGGAAGGGCT GATCGCGGTC GGCCAGGTCG CGAAAAAATA CGGCCTGTAC
ACGAAGATCA CGGGCGGCCA GCGCGTCGAC CTGTTCGGTG CGCGCGTCGA GCAGCTGCCG
TCGATCTGGG AGGAACTGAT CGCGGCCGGC TTCGAATCGG GGCACGCGTA CGGCAAGGCG
CTGCGCACCG TGAAGTCGTG CGTCGGGTCG ACGTGGTGCC GCTACGGCGT CGACGATTCG
GTCGGCCTCG CGATCGACCT GGAGAACCGC TACAAGGGGC TGCGCGCGCC GCACAAGATC
AAGTTCGGCG TGTCCGGCTG CACGCGCGAG TGCGCGGAAG CGCAGGGCAA GGACGTCGGC
ATCATCGCGA CCGAGAAGGG CTGGAACCTG TACGTGTGCG GCAATGGCGG GATGAAGCCG
CGCCACGCGG AACTGCTCGC GTCCGATCTC GATCGCGACA CGCTGATCCG CTACATCGAC
CGCTTCCTGA TGTTCTACGT GCGCACGGCC GACCGGCTGC AACGCACCAG CGTGTGGCGC
GACAACCTCG AAGGCGGGCT CGACTACCTG ATCGACGTCG TCGTGCACGA CAAGCTCGCG
ATCGCGGCCG AGCTCGAAGC CGACATGCAG CACGTGGTCG ACACCTACGA GTGCGAATGG
AAGCGCGCCG TCACCGATCC GGAAACGCGC AAGCGCTTCC GCCACTTCGT GAACAGCGAC
GCGCCGGACA CGACCATCGA GTTCGTCGAG ACGCGCGGCC AGATCCGGCC GGCGACGCCC
GCCGAGCGCG CGGGCGGCAA GCCCGTGGCG ATTCCGGTCG TCGCCGAACC CGCGACCGTT
TGA
|
|---|
| Protein sequence | MKLIVIGHGM VGHKLLECVA TQTGEAGTAG ALQVTVLGEE PRPAYDRVHL SEFFAGKSAD
DLSLVEPGFF ERHPQFDLRL NAQVASIDRA AHTVTLASGE TLAYDKLVLA TGSRPFVPPV
PGRERAGCFV YRTIEDLEAM QACGAHAKRG VVIGGGLLGL ECAKALRDMG LDTHVVEFAP
RLMAVQVDDG GGRMLRSKIE ALGVTVHTGK NTLEIVDGDE GAHRMAFADG THLDTDMIVF
SAGIRARDEL ARACGLDIGP RGGVAIDDAC RTSDADIYAI GECAAWNGTV YGLVAPGYDM
ARVVAKQLAG DADEAAAAAF AGADMSTKLK LMGVDVASIG DAHGTTAGSR TYQYADERRQ
VYKKLVVSDC GKFLHGAVMV GDAAEYGTLL QMMLNRIELP ESPEFLILPS SDGAAKPAIG
VDALPEGAQI CSCNNVSKSQ ICAAVADGAT SLGALKTCTG AGTSCGGCVP LVTQIMKAEM
KKQGLAVNNH LCEHFPYSRQ ELFHLIRVER ITTFDALLHK HGRGLGCDVC KPAVAGILAS
CFNEFVLKKE HAGLQDSNDY YLANIQRDGT YSVVPRMPGG EVTPEGLIAV GQVAKKYGLY
TKITGGQRVD LFGARVEQLP SIWEELIAAG FESGHAYGKA LRTVKSCVGS TWCRYGVDDS
VGLAIDLENR YKGLRAPHKI KFGVSGCTRE CAEAQGKDVG IIATEKGWNL YVCGNGGMKP
RHAELLASDL DRDTLIRYID RFLMFYVRTA DRLQRTSVWR DNLEGGLDYL IDVVVHDKLA
IAAELEADMQ HVVDTYECEW KRAVTDPETR KRFRHFVNSD APDTTIEFVE TRGQIRPATP
AERAGGKPVA IPVVAEPATV
|
|---|
| |