| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5774 |
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| Symbol | |
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| ID | 6128579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2946344 |
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| End bp | 2947900 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641652859 |
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| Product | 3-hydroxy-acyl-CoA dehydrogenase |
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| Protein accession | YP_001779386 |
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| Protein GI | 170738126 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02279] 3-hydroxyacyl-CoA dehydrogenase PaaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTTT CCTCTGCACA TTCGGTGAAC TCGGGCGCGC TGGCGCCGTC GGCCGTCGTC
GGCGTGATCG GCGCCGGCGC GATGGGCGCG GGCATTGCGC AGGTCGCGGC GGCGGCCGGC
CATGCGGTGC TGCTGTACGA CCTGAACGAA GCAGCCTGCG ACAAGGCGCT GGCCGGCATC
CGCGCCCAGT TCGCGCGGCT GGCAGAGAAG GGCCGGCTCG AACCGGCGCA GGCCGACGCA
GCGGGCAATC GAATCCGCGC GGTGCGCGCG CTGGCCGATT TCGCGGGCGC CGCGCTGATC
GTCGAGGCGG CGGCCGAACG GCTCGACGTG AAGCGCGAGA TCTTCGCGAC CCTCGAACGT
CATGTCGACG ACGCGTGCGT GCTGGCGACC AACACGTCGT CGATCTCGAT CACGTCGATC
GCGGCCGGCC TGCGCGTGCC GCAGCGCGTC GCCGGCCTGC ATTTCTTCAA TCCGGCGCCG
CTGATGGCGC TCGTCGAGGT GGTCAGCGGG CTCGCGACCG CGCCCGAGGT CGCCGGGATG
CTGCATGCGA CCGCCGCCGC GTGGGGCAAG CAACCGGTGA TGGCGAAATC GACGCCGGGC
TTCATCGTGA ACCGCGTCGC GCGGCCGTAT TACGCGGAGG CGCTGCGCGT GCTGAACGAG
CAGGGCGGCG CGCCGGCGTC GATCGACGCG GTGATGCGCG AAGCCGGCGG CTTCCGGATG
GGGCCGTTCG AGCTGATGGA CCTGATCGGC CACGACGTGA ATTTCGCGGT GACCGAGTCG
GTGTTCCGCG CGTACTTCAA CGACCCGCGC TACACGCCGT CGCTGATCCA GCAGGAGCTC
GTGAACGCGG GCTTCCTCGG GCGCAAGTCC GGGCGCGGCT TCTATTCGTA TGCGGACGGC
GCGACGACGC CCGCGCCCGA TCTCGAGCCG CCGCGCGCCG CGCCGGCGGA GATCGCGCTG
TTTGCGCAGG ACGGCCCGGC CGCCGCGCTG CATGCGCGCC TGGCCGAACG GATCGAAGGC
GCGCGGCGCA ACGGCGCGCA TGCGGACGAA CTGCTCGCCG TGGCCGGCCG CGCGTCGATC
GCGCTGACCG ATGGCCGCAC CGCGACCGCG CGCGCCGCGC AAACGGGCGT GGCCGATCTC
GTGCTCGTCG ACCTGGCGCG CGATTACGCG CAGGCCGGGC TCGTCGCGCT GACGCGTGCG
CTCCAGTGCA ACGACGCCGC GTATGCGGAC GCGGTCGGCC TGTTCCAGCA GGCGGGCTTT
CGCGTGGTCG GCATCGCGGA CGTGCCGGGG ATGGTCGCGA TGCGCACCGT CGCGATGCTC
GCGAACGAAG CGGCCGATAC GGTCAACCAG GGCGTGTGCT CGCCTGCCGA TCTCGATCTC
GCGATGGAGA AGGGCGTGAA CTATCCGTGC GGCCCGCTTG CGTGGGCCGA TGCGATCGGG
ATCGGCCGCG TGCATCGCGT GCTGTCGAAC CTGGCGGCGA GCTACGGCGA GGACCGCTAT
CGCGTGTCGC CGCGCGTCGC CGCGCTGCAC GCGGCCGGCC GCACGTTCCG GTCGTAG
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| Protein sequence | MAVSSAHSVN SGALAPSAVV GVIGAGAMGA GIAQVAAAAG HAVLLYDLNE AACDKALAGI
RAQFARLAEK GRLEPAQADA AGNRIRAVRA LADFAGAALI VEAAAERLDV KREIFATLER
HVDDACVLAT NTSSISITSI AAGLRVPQRV AGLHFFNPAP LMALVEVVSG LATAPEVAGM
LHATAAAWGK QPVMAKSTPG FIVNRVARPY YAEALRVLNE QGGAPASIDA VMREAGGFRM
GPFELMDLIG HDVNFAVTES VFRAYFNDPR YTPSLIQQEL VNAGFLGRKS GRGFYSYADG
ATTPAPDLEP PRAAPAEIAL FAQDGPAAAL HARLAERIEG ARRNGAHADE LLAVAGRASI
ALTDGRTATA RAAQTGVADL VLVDLARDYA QAGLVALTRA LQCNDAAYAD AVGLFQQAGF
RVVGIADVPG MVAMRTVAML ANEAADTVNQ GVCSPADLDL AMEKGVNYPC GPLAWADAIG
IGRVHRVLSN LAASYGEDRY RVSPRVAALH AAGRTFRS
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