| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5773 |
|---|
| Symbol | |
|---|
| ID | 6128578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 2944713 |
|---|
| End bp | 2945801 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641652858 |
|---|
| Product | sodium/calcium exchanger membrane region |
|---|
| Protein accession | YP_001779385 |
|---|
| Protein GI | 170738125 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0387] Ca2+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTCT CGTCCAACCA GCTCCCGCGC TGGACCCTCT GGGCCCCGCT TGCCGCCTGG
CTGGTACTCG CGCTGTCGCG CGTCGTGCCG GCCGAAGGCC TCGTCATCGC GGTATTCGCC
GCCGCACTCG CCGGCGCCGT GTTTGCCGCC GTCCACCATG CGGAAGTCGT CGCGCACCGT
GTCGGCGAAC CGTTCGGCAC GCTCGTGCTC GCGGTCGCCG TGACCGTCAT CGAAGTCGCG
CTGATCGTAT CGGTGATGCT CGGCGCAGGC CCGGAAAAAT CGGGCCTCGC CCGCGACACC
GTCTACGCCG CCGTGATGAT CATCTGCAAC GGCATCGTCG GCATCTGCCT GCTGGTCGGC
GCATGGAAGC ACGGCGAACA GGACTTCCAG GGGCGCGGCG CGAGCAAGGC GCTCGCGGTG
CTCGCGTCGC TGTCGGTGCT GTCGCTCGTG ATGCCGAACT ACCTGAGCGC CGCACCGGGC
CCGTTCTTCT CGAAATCGCA GCTTGCGTTC GCCGGCGTCG CGTCGCTCGT GCTGTATGGC
GCGTTCGTGT TCGTGCAGAC CGTGCGCCAC CGCGACTACT TCCTCGCCGC GCACGACAGC
GCCAACGAAG CGGTGCACGC GGCAGCGCCG AGCAACCGCA CCGCGATCAC CAGCATGGTG
CTGCTGTTCG CGAGCCTGGT CGCGGTCGTG CTGCTCGCGA AGCTGCTGTC GCCGGCCGTC
GAGCATGCGG TGCTGAAGCT CGGCGCGCCC GAAGCCGCGG TCGGTATCGT GATCGCCGCG
CTCGTGCTGC TGCCGGAAGG GCTCGCGGCC GTCACCGCCG CGCGCGCGAA CCGCCTGCAG
ACCAGCATGA ACCTCGCGCT CGGTTCGGCG CTCGCGAGCA TCGGGCTCAC GATTCCGACC
GTCGCGGCCG TGTTCATCTG GGTCGGCCAG CCGCTCACGC TCGGGATCGG CGCAATGGAG
ACGGTCCTGC TCGCGCTCAC GCTGCTGGTC AGCACGCTCA CGCTGAGCCA GGGGCGCACG
ACGGTGCTGC ACGGCGTCGT GCACGTCGCG CTGTTCGCCG CCTATCTGTT CCTGTCGTTC
ACCCACTGA
|
|---|
| Protein sequence | MPLSSNQLPR WTLWAPLAAW LVLALSRVVP AEGLVIAVFA AALAGAVFAA VHHAEVVAHR
VGEPFGTLVL AVAVTVIEVA LIVSVMLGAG PEKSGLARDT VYAAVMIICN GIVGICLLVG
AWKHGEQDFQ GRGASKALAV LASLSVLSLV MPNYLSAAPG PFFSKSQLAF AGVASLVLYG
AFVFVQTVRH RDYFLAAHDS ANEAVHAAAP SNRTAITSMV LLFASLVAVV LLAKLLSPAV
EHAVLKLGAP EAAVGIVIAA LVLLPEGLAA VTAARANRLQ TSMNLALGSA LASIGLTIPT
VAAVFIWVGQ PLTLGIGAME TVLLALTLLV STLTLSQGRT TVLHGVVHVA LFAAYLFLSF
TH
|
|---|
| |