| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5769 |
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| Symbol | |
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| ID | 6128574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2939745 |
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| End bp | 2941631 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641652854 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001779381 |
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| Protein GI | 170738121 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component
[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATGC ACTCCGTGTC GGGCGCCGCG CCGGCTCCCG CTGCCGGCCA GCCGGCGCAT
CGCGTCGCCC GCGTGCTGGA TGCGATGCTG CGCTGGCTCG AGTATCTGTC GGCCGCGGTG
CTCGCCGTCG ACGTGCTGGT CGTGTTCGTG TCGGTCGTGT TCCGCTATTT CCTGCACGAC
CCGGTCGACT GGGCCGAGGA AGTGGCGAGC GCGCTGATGA TCGTGCTGGT GTTCTTCGGC
GCGGCGACGG TGCTGGGGCG CAGCCAGCAT GTCGGCATCG ACGTGTTCCG CGGCCGGCTG
CCGGCACGCT GGCAGGGCGC GCTGATCCAG GTCGGCCACT GGATCGTGGC GGCCGTCGCG
CTGAACCTGC TGGTGTCGTC GTGCCAGTTG CTCACGGATT CGTACGACCA GCTGACGACG
GGCGGCCTGC CGGGCTGGAT CAACGGGTAT CCGATGATGT TCGGCGCGCT GTTCATGACC
GTATTCGCGC TCGCCAATGC GCTGAACGCG CCGCGCCGCC GGGTGATCGG CACGTTCGTG
TGCTGCGCGG CGCTCGCGGG CGCCGTGTAC GGCTGGAACG CGCTGTGGCC CGCGCATGCG
GTCGCGCCCG GCACGCTGCT GGTCGCGGGC TTCGTCGGCG GGCTGGTGCT CGGCGTGCCG
ATCGGGTTCG TGCTGGCGTT TTCGGCGCTG CTGTATTTCC TCGCCGATCC GACGCTGCCG
CTGCTCGTCT ACTCGCAACA GGTGATGGCC GGGGCCGACC ACTTCGTGCT GCTCGCGGTG
CCGTTCTTCG TGCTGGCGGG GCTGCTGATG GAGACCAACG GGATGTCCGC GCGGCTCGTC
GAGTTGCTGC TGCGGATCTT CGGGCGCGTG CGGGGCGGGC TCGGCCTGAT CGTGATCTTC
GCGACGGCGT GCTTTTCCGG CGTGTCGGGC TCGAAGCTGG CCGATATCGC GGCGGTGGGC
GGCGTCGTGA TGCCGGCGGT GCGCCGCGCG CGGCAGGACC CGAACGAAAC CGCCGCGCTG
CTCGCGTGCA GCGCGGTGAT GGCCGAGACG ATTCCGCCGT GCGTGAACAT GATCATCATG
GGCTTCGTCG CGAACATCTC GATCGCCGGG CTGTTCGTCG CGGGGATCGT GCCGGCGGCC
GTGCTGGCCG CGTCGCTCGC GGTCGTGACG GTGATCACGG GGCGCAAGAT CGACGTGGCC
GAGGTGTTCG GCGAGCGTCG CGCGTGGCTG CCGCTCGCGG GCGGCGCGCT CGTCGCGCTG
GTCATGGTCG CGATGATCGG CAAGGGCGTG ACGTCTGGGA TCGCGACGTC GACCGAAGTG
TCGGCGTTCG CGGTGGTCTA CGCGCTCGTC GTGGGCTGGC TCGCGTTTCG CGAACTGACG
TGGCGCTCGG TCGGCCGCGT GTTCGTGCGC GCCGCATCGA TGGCGAGCGG TATCCTGTTC
ATCGTCGCGG CGGCGTCGAG CGTGTCGTTC GCGCTGTCGA TCGAGCAGAT TCCGGCCCTC
GTCTCGGGCA CAATGACGGC GTTTGCCCAT CAATACGGCG CGACGATGTT CCTGCTGCTG
TCGGCGCTGC TGATGATCGT GTTCGGCGCC GTGCTCGAAG GCGCGCCCGC GCTGATCATC
TTCGGGCCGC TGCTCGCGCC GATCGCACTG CAGCTCGGTA TCAATCCGCT GCATTTCGGC
ACGGTCGTGG TGGTGGCGAT GGGGTTCGGG TTGTTCGCGC CGCCGGTCGG GCTCGGGCTG
TTCACGACGT GCGCGATCAC GGGCACCGAG GTTGGGCGCG TAGCCCGGCC GATGGTGAAA
TACCTGCTGG TGCTGTTCGC TGCTCTCGTG GCGCTGATCT TCGCACCGGC GTTTTCGTTG
TGGCTGCCGG CCCATTTCGG CCTGTAG
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| Protein sequence | MDMHSVSGAA PAPAAGQPAH RVARVLDAML RWLEYLSAAV LAVDVLVVFV SVVFRYFLHD
PVDWAEEVAS ALMIVLVFFG AATVLGRSQH VGIDVFRGRL PARWQGALIQ VGHWIVAAVA
LNLLVSSCQL LTDSYDQLTT GGLPGWINGY PMMFGALFMT VFALANALNA PRRRVIGTFV
CCAALAGAVY GWNALWPAHA VAPGTLLVAG FVGGLVLGVP IGFVLAFSAL LYFLADPTLP
LLVYSQQVMA GADHFVLLAV PFFVLAGLLM ETNGMSARLV ELLLRIFGRV RGGLGLIVIF
ATACFSGVSG SKLADIAAVG GVVMPAVRRA RQDPNETAAL LACSAVMAET IPPCVNMIIM
GFVANISIAG LFVAGIVPAA VLAASLAVVT VITGRKIDVA EVFGERRAWL PLAGGALVAL
VMVAMIGKGV TSGIATSTEV SAFAVVYALV VGWLAFRELT WRSVGRVFVR AASMASGILF
IVAAASSVSF ALSIEQIPAL VSGTMTAFAH QYGATMFLLL SALLMIVFGA VLEGAPALII
FGPLLAPIAL QLGINPLHFG TVVVVAMGFG LFAPPVGLGL FTTCAITGTE VGRVARPMVK
YLLVLFAALV ALIFAPAFSL WLPAHFGL
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