Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5768 |
Symbol | |
ID | 6128573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 2938710 |
End bp | 2939741 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641652853 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_001779380 |
Protein GI | 170738120 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCT ACACCCGCCG GCGCTTTCTG CAGACGGTGT CCGCCGCCAC GCTCGCGGCC GCGGGCGGCT TGCCGGAAAG CGTGCGCGCG CAGCAGCCGG TCGTCACGCT GCGCTGCTCG TCGTCGATGC CAGCCGACCA GAACGCCGCG CACTACGTGT GGTATGAGCG TCTCGCCGCG AACCTGAAGG CGAGCGTGGG CGACGCGATC CGGGTCGACT ATTTTCCGAA CAGCCAGCTC GGCAAGGAGA GCGATGTCGT GCAGCAGGTC AAGATCGGCG CGATCGACAT GATGATCGCG GGCTCGTCGA TCTGGGCCAC GGTCGCGCCG GAGCTCGGGA TGCTCGATCT CGGCTACCTG TTCGACAGCT ACGCGCACGT CGCGAAGGCG CTCGACGGCC CGGTCGGCAC GAGCCTGAAC GCGCTGCTGC AAAAGCGCGC GGGATGCTCG GTGCTGACCT GGGGCTCGCA TTTCGGCGGG CGCTGCGTGT TCACGAAGCA GCCGGTGACG GCGCTGTCCG GCCTGAAGGG GACGAAGCTG CGCGTGCTGC CGACGCCCGC GTTCATGGAC ACTTTCAAGG CGATGGGCGC GGTGCCGACG CCGATTCCGT TCGGCGAGCT GTACATGGCC GTGCAGACGG GCGTCGTCGA CGGTCTCGAA CACGATCCCG CCACGGTGCT TGCGAGCCGC TTCGACGAGA TCGTGAAGTC GTGCTGGCAA TCGCGCCACG TGTTCGCGGC GATGACCGTC GTGATGGGGC GGCGTGCGCT CGACCGGATT CCGGCCAATC TGCGGCCCGC CTTCGACCGC GCGGTGGCCG ACGCGACCGT GCAGCAGCGC GCGATTGCCG CGCAGAAGGC CGCGCAGGCG GAGCAGGCGC TGAAGCAGCG CGGCATGGCG TTTTACCCGC TGGCCGATGG CGAGCGCGCG GCGCTGCGGC AGACGATGCA AGACCGCCTG TATGCGGCGT TCGCGAAGCA GTATCCGGCT ACCGCGCCGC TGTTTCCGGC GATTGCCGCC GCGCGGGGGT GA
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Protein sequence | MNTYTRRRFL QTVSAATLAA AGGLPESVRA QQPVVTLRCS SSMPADQNAA HYVWYERLAA NLKASVGDAI RVDYFPNSQL GKESDVVQQV KIGAIDMMIA GSSIWATVAP ELGMLDLGYL FDSYAHVAKA LDGPVGTSLN ALLQKRAGCS VLTWGSHFGG RCVFTKQPVT ALSGLKGTKL RVLPTPAFMD TFKAMGAVPT PIPFGELYMA VQTGVVDGLE HDPATVLASR FDEIVKSCWQ SRHVFAAMTV VMGRRALDRI PANLRPAFDR AVADATVQQR AIAAQKAAQA EQALKQRGMA FYPLADGERA ALRQTMQDRL YAAFAKQYPA TAPLFPAIAA ARG
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