Gene Bcenmc03_5758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5758 
Symbol 
ID6128563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2927836 
End bp2928738 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content69% 
IMG OID641652843 
ProductLysR family transcriptional regulator 
Protein accessionYP_001779370 
Protein GI170738110 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0665563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACC ATCAGCTGAA AGCGTTCGTC ACCGCCGCGG AGGAAGGCAG CATTCGCGCG 
GCCGCGCGGC GCCTGAACGT GTCGCCGGCC GCGCTGACGA AGGCGGTCAA GGAGCTGGAG
ATCGCGCTCG GCGTATCGCT CGTCGTGCGT ACCGCGCGCG GCGTGCAGCT CACTGCGTTC
GGCCAGCAAC TGCAGGTGCG CGCGCGGCTG ATCGTCGCCG AAATGCAGCG CGCCCGCGAC
GACATCGAGC AGGCGCAGGG CGCAATGACG GGTTCCGTCG CGGCGGCGAT CACGCCCGCG
GCGGCGGTGA CGATCCTGCC CGACGCATTC CGCGCATTCC GGCGCCGCTT TCCGGTGGCA
CGCGTCAATC TGGTCGAAGG GTTTCCGGGC GTCGCGCTGC CGCGTCTGCA CGACGGTTCG
CTCGATTTCG CGGTGGCCGT CGTCGTGCCC GAACTGCTGG CCGCCGAGTT CGATCATGCG
GAGCTCTACG CGAGCCGCTC GCTGATCGTC GCGCGCAAAG GGCATCCGCT CGCGTCGGCC
ACATCGCTCG CCGATCTCGT CGAGGCCGAC TGGCTGATGA ATCCGTCGCC GGAAAGCTCC
ACGCAGGTGC TGTTCAACTC GTTCGTCGCG TACGGGTTGC CGGTGCCCGC GCGTGTCGTC
GAATGCCCGA GCTTCGGTCT CGCGCACAGC CTGATGACCG GTTGTGACCT GATCGCATCG
ATGCCCGAGC AATTGCTGCA AGGCGAGTGG GCGCGCGATC AGCTCGCGGT GCTGCCGATT
CGCGAGCGCT TGCCGGCCGT ATCGGTGCAG GTCGTTACGC GCCGCGACAG CCCGCTGACG
CCGGCCGCAG CGATGCTGCT CGATTGCCTG CGCGATTCCG CGCGACGCAA GGGGCTGCGA
TGA
 
Protein sequence
MKYHQLKAFV TAAEEGSIRA AARRLNVSPA ALTKAVKELE IALGVSLVVR TARGVQLTAF 
GQQLQVRARL IVAEMQRARD DIEQAQGAMT GSVAAAITPA AAVTILPDAF RAFRRRFPVA
RVNLVEGFPG VALPRLHDGS LDFAVAVVVP ELLAAEFDHA ELYASRSLIV ARKGHPLASA
TSLADLVEAD WLMNPSPESS TQVLFNSFVA YGLPVPARVV ECPSFGLAHS LMTGCDLIAS
MPEQLLQGEW ARDQLAVLPI RERLPAVSVQ VVTRRDSPLT PAAAMLLDCL RDSARRKGLR